Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5442 |
Symbol | |
ID | 5359182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5606088 |
End bp | 5609039 |
Gene Length | 2952 bp |
Protein Length | 983 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640814487 |
Product | two-component sensor CbrA |
Protein accession | YP_001350766 |
Protein GI | 152986727 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGACGA GCTTTAGCCT CACCCAGCTG ATCCTGATCA GCGTCGCCTA TCTCTTCACC CTGTTCGGCA TCGCCTGGAT CGCCGAGCGC GGCTACGTGC CGCGCCGGCT GGTGCGCCAC CCGCTGGTCT ACACCCTGTC GCTGGGGGTC TATGCCAGCG CCTGGGCCTT CTACGGCACG GTCGGCCTGG CCTACCAGTA CGGCTACGGC TTCCTGGCCA TCTACCTGGG GATCTCCGGG GCCTTCCTGC TCGCCCCGGT GTTGCTATAC CCGATCCTGC GGGTGACCCG CGCCTACCAG TTGTCCTCGC TGGCCGACCT GTTCGCCTTC CGCTTCCGCA GCACCTGGGC CGGTGCCCTG ACCACCCTGT TCATGCTGAT CGGCGTGCTG CCGATGCTGG CCCTGCAGAT CCAGGCGGTC GCCGACTCGA TCAGCATCCT CACCCGAGAC CCGGCCCAGG AGCGGGTCGC GTTCGTCTTC TGCACCCTGA TCACCCTGTT CGCGATCCTC TTCGGCGCCC GCCACATCGC CACCCGCGAG CGCCACGAGG GGCTGGTGTT CGCCATCGCC TTCGAATCGC TGGTCAAGCT GGTGATGCTC GGCAGCATCG GCCTCTACGC CCTGTACGGG GTCTTCGGCG GGCCGGAAGG CCTGGAAATC TGGCTGTTGC AGAACCAGAC CGCGCTGACC ACCCTGCACA CCCCCCTGGC CGAGGGGCCG TGGCGGACGT TGCTGCTGGT GTTCTTCGCC GCGGCCATCG TGATGCCGCA CATGTATCAC ATGATCTTCA CCGAGAACCT CAACCCGCGG GCGCTGATCT CCGCCAGTTG GGGCCTGCCA CTGTTCCTCC TGCTGATGAG CCTGGCCGTG CCGCCGATCC TCTGGGCCGG CCTGCGCCTC GGCGCCTCGA CCACCCCGGA GTACTACACC ATCGGCCTCG GCCTGGCGGT GGACAGCCCG GCCCTGGCCC TGGCCGCCTT CGTCGGCGGG ATCTCCGCCG CCAGCGGGCT GACCATCGTG ATGACCCTGG CGCTATCGGG CATGGTCCTC AACCACCTGG TGCTGCCGCT CTACCAGCCA CCGGCGCAGG GCAACATCTA CCGCTGGCTG AAGTGGACCC GGCGCCTGCT GATCGTCGCC ATCATCATGG CCAGCTATGC CTTCTACCTG CTGCTGGGCG CCGAGCAGGA CCTGTCCAAC CTCGGCATAG TGTCCTTCGT CGCCACCCTG CAGTTCCTCC CCGGCGCCCT CTCGGTGCTG TACTGGCCGA CCGCCAACCG CCGCGGCTTC ATCGCCGGGC TGATCGCCGG GATGCTGGTC TGGGCGATCA CCATGCTGCT GCCGCTGATG GGCAACGTGC AGGGCCTGTA CCTGCCGCTG TTCGACATGA TCTACGTGCT GGACGACTCC AACTGGCACC TGGCGGCGCT GTCCTCGCTG GCGGCCAACG TCCTGGTCTT CACCCTGGTC TCGCTGTTCA CCGAAGCCAG CGACGAAGAG AAAGGCGCGG CCGAGGCCTG CGCGGTGGAC AATGTGCGCC GTCCGCAGCG CCGCGAGCTG TTCGCCGGCT CGCCGCAGGA GTTCGCCAGC CAGCTGGCCA AGCCGCTGGG CGCGAAGACC GCGCAGAAGG AAGTCGAGCA GGCCCTGCGC GACCTCCACC TGCCCTTCGA CGAACGCCGC CCCTACGCCC TGCGCCGCCT GCGCGACCGC ATCGAGGCCA ACCTGTCCGG GCTGATGGGG CCGAGCGTGG CCCAGGACAT CGTGGAAACC TTCCTGCCCT ACAAGACCAG CGAGGAAAGC TACGTCACCG AGGACATCCA CTTCATCGAG AGCCGCCTGG AGGATTACCA CTCGCGGTTG ACCGGTCTCG CCGCCGAACT CGACACCCTC CGCCGCTACC ACCGGCAGAC CCTGCAGGAC CTGCCGATGG GCGTCTGCTC GCTGGCCAAG GACCAGGAAG TGCTGATGTG GAACCGCGCC ATCGAGGAAC TCACCGGGGT CGGCGCGCAG AAGGTCGTCG GCTCGCGCCT GTCGGCCCTG CCGGAACCCT GGAAGGGCCT GCTGGAACGC TTCATCGACG CTCCCGACGA GCATCTGCAC AAGCAGCGCC TGGTCTACGA CGGCCACACC CGCTGGCTGA ACCTGCACAA GGCGGCGATC GAGGAGCCCC TGGCGCCGGG CAACAGCGGC CTGGTGCTGC TGGTCGAGGA CCTCACCGAA ACCCAGTTGC TGGAAGACAA GCTGGTCCAC TCCGAGCGCC TGGCATCCAT TGGCCGCCTG GCCGCCGGCG TCGCCCACGA GATCGGCAAC CCGATCACCG GCATCGCCTG CCTGGCGCAG AATCTACGCG AGGAGCGCGA GGGCGACGGC GAACTGACCG AAATCAGCGA ACAGATCCTC GACCAGACCA AGCGCGTCTC GAGGATCGTC CAGTCGCTGA TGAGCTTCGC CCATTCCGGC AGTCACCTGC AGGCCCTGGA GCCGGTATGC CTGAGCGAGG TCGCCCAGGA GGCCATCGGC CTGCTGTCGC TGAACCGGCG CAGCGTCGAG GTGCAGTTCT TCAACCTGTG CGATCCGGCG CACTGGGTCG AGGGCGACTC TCAGCGCCTG GCCCAGGTGC TCATCAATCT GCTCTCCAAC GCCCGCGACG CCAGTCCGCC GGGCGGGGCG ATCCGGGTCC GCAGCGAAGC CTCCGAACAC ACCGTGGACC TGATCGTCGA GGACGAAGGC AGCGGCATCC CGAAAGCGAT CATGGACCAG CTGTTCGAGC CGTTCTTCAC CACCAAGGAC CCCGGCAAGG GCACCGGGCT CGGCCTCGCA CTGGTCTATT CGATCGTGGA AGAGCATTAT GGACAGATAA CCATCGAGAG CCCGACGGAT CACTCGCGAG AAGGCGGCAC CCGCTTCCGC GTGACCCTGC CGCGGCACCC TGGCCCGACG GCCGAGCTGT AG
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Protein sequence | MLTSFSLTQL ILISVAYLFT LFGIAWIAER GYVPRRLVRH PLVYTLSLGV YASAWAFYGT VGLAYQYGYG FLAIYLGISG AFLLAPVLLY PILRVTRAYQ LSSLADLFAF RFRSTWAGAL TTLFMLIGVL PMLALQIQAV ADSISILTRD PAQERVAFVF CTLITLFAIL FGARHIATRE RHEGLVFAIA FESLVKLVML GSIGLYALYG VFGGPEGLEI WLLQNQTALT TLHTPLAEGP WRTLLLVFFA AAIVMPHMYH MIFTENLNPR ALISASWGLP LFLLLMSLAV PPILWAGLRL GASTTPEYYT IGLGLAVDSP ALALAAFVGG ISAASGLTIV MTLALSGMVL NHLVLPLYQP PAQGNIYRWL KWTRRLLIVA IIMASYAFYL LLGAEQDLSN LGIVSFVATL QFLPGALSVL YWPTANRRGF IAGLIAGMLV WAITMLLPLM GNVQGLYLPL FDMIYVLDDS NWHLAALSSL AANVLVFTLV SLFTEASDEE KGAAEACAVD NVRRPQRREL FAGSPQEFAS QLAKPLGAKT AQKEVEQALR DLHLPFDERR PYALRRLRDR IEANLSGLMG PSVAQDIVET FLPYKTSEES YVTEDIHFIE SRLEDYHSRL TGLAAELDTL RRYHRQTLQD LPMGVCSLAK DQEVLMWNRA IEELTGVGAQ KVVGSRLSAL PEPWKGLLER FIDAPDEHLH KQRLVYDGHT RWLNLHKAAI EEPLAPGNSG LVLLVEDLTE TQLLEDKLVH SERLASIGRL AAGVAHEIGN PITGIACLAQ NLREEREGDG ELTEISEQIL DQTKRVSRIV QSLMSFAHSG SHLQALEPVC LSEVAQEAIG LLSLNRRSVE VQFFNLCDPA HWVEGDSQRL AQVLINLLSN ARDASPPGGA IRVRSEASEH TVDLIVEDEG SGIPKAIMDQ LFEPFFTTKD PGKGTGLGLA LVYSIVEEHY GQITIESPTD HSREGGTRFR VTLPRHPGPT AEL
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