| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5301 |
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| Symbol | |
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| ID | 5355837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 5458049 |
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| End bp | 5460421 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640814347 |
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| Product | hypothetical protein |
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| Protein accession | YP_001350633 |
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| Protein GI | 152987295 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCTCGCC CGTGTCAGCG GCGCTCCCGC CGCCACCGCT CGCTACTGAT CGGCCTGGCG
CTGCTCTCCC CTGTCCATGC GACGGACTAC CTGGCCGGAC TGCCGTCGCC GCAACCCGCT
CCGTCCGGCG GCGGCAACGT CCTCTACTAC CTGGAACTGG TGATCAACGG CCGCGACAGC
GGCCAGGTGG TGCCGGTCAA CGCCGCCGAT GGCCATTACC TGCTCGACGC CGAGGCCCTG
CGCGAAGCCG GCGTACGCCT GCCTGGCAAC CCCGCCGGAC AGGTCGCGGT GGACGCCCTG
TCCGAGGTCC GGGCGGACTA TGACAGCGCC AGCCAGCAAC TGCACCTGCA AGTACCGCCG
GACTGGCTGC CGGAGCAGAG CTTCGACGAT CCCGGACTGG TCGCCCGCAC CCCGGCGCGC
AGCAGCCTCG GCGCGCTGTT CAACTACGAC CTGTACTACT CGGCCCCCGC CGACGGCGCC
ACGCCCTGGC TTTCCGCGCT GCTCGAGCAA CGTCTGTTCG ACGGCTTCGG GGTGATCTCC
AACACCGGCG TCTACACCCG CTATTTCGGC GACGCCGACA ACCTCGACAG CCGCTACCTG
CGCTACGACA CCTACTGGCT GTACAACGAC GAACGCAACA TGCACAGCTA CCAACTGGGC
GACTACGTCA ACGGCGCGCT GAACTGGACC ACCCCGGTAC GCATGGGCGG CTTTCGCTTC
GCCCGCAACT TCGGCGTACG TCCGGACCTG GTCACCTATC CGCTGCTGCG CTTCGACGGC
CAGGCCGCGG TGCCCAGCAC CGTCGACCTG TTCATCAACG GCTACAAGGC CAGCAGCGCC
GACCTGCAAC CCGGCCCCTT CGCCATCAGC AACGTGCCGT ACATCAACGG AGCCGGCGAA
GCCACGGTGG TGACCACCGA CGCCCAGGGC CGACAAGTGG CGACCAGCCT GCCGTTCTAC
GTATCCAACA CCCTGCTGGC GCGCGGCCTG AGCGATTTCG ACCTGTCCGT CGGGCGCCTG
CGCGGCGACT ACGGCCTGCG CAACTTCTCC TATGCCGACA GCGCCGCCAG CGGCATCTAC
CGCTACGGCG TCAGCGACCG CCTGACCCTC TCCACCCACG CCGAGGCCGC CAGCGACCTG
CGCCTGCTCG GCATCGGCGG CGACATCGCC GTCGCCACCT TCGGTACCCT CAGCCTGGCG
GCCAGCGGCA GCGACGGCCA GGGCGACAGC GGCCAGCAAT ACCTGCTCGG CTACTCCTAC
TATTCGCGAC GGCTCGGCCT CAGCCTGCAG CACATCGAGC GCAGCGCCGG TTATGGCGAC
CTCGGCACCC TGGATGGCGA GTACCAGTTG AGCCGGCGCA CCGACCAGGC TACCGCCAGC
CTGACCTTCG ACGAGCAGGG CACCATCGGT ACCGGCTACT TCGACATCCG CGCCCGCGAC
GGCAGCCGCA CGCGCCTGGC CAACCTCTCC TACAGCCGCC CGATCGGCAG CCGCAGCAGC
TTCTACCTGG CGCTGAACAA GGATCTCGAC GGCGACGGCT ACAGCGCGCT GATGCAACTG
GTGATTCCCT TCGACATCAA CGGCCTGCTG AACATCGGCG TCACCCGCGA CAGCGACCGG
CGCTACAGCG AGCGGGTGAT CTGGAGCCGC TCCACGCCGA GCCAGGGCGG CCTCGGCTGG
AACCTCGGCT ATGGCGGCGG CGCCAGCCGT TACCAACAGG CCGACCTGAC CTGGCGCATG
CAGAACGTAC AACTGCAGGG CGGCCTCTAT GGCGAGACCG GCAACTACAC GCGCTGGGCC
GATCTCAGCG GCTCGCTGGT ATGGATGGAC AACGCCGTGT TCGCCAGCAA CCGGATCAAC
GACGCCTTCG TCCTGGTCAG CACCAAGGGC TATCCACAGG TGCCGATCCG CTACGAGAAC
CAACTGATGG GCAGCACCGA CGACAACGGC CACCTGCTGG TGCCCTGGGT CGCGGCCTAC
TACCCGGCGA AGTTCCAGAT CGAGCCGCTG GACCTTCCGG CCAACGTCAG CGCGCCCGAA
GTCGAGCAGC GCGTGGCGGT ACGCCAGGGC AGCGGCCTGC TACTGGATTT CCCGATCCGT
GCCGTGGTCG CCGCCAGCAT CAGCCTGGTG GACGAGCGCG GCGAACCGCT GCCGCTGGGC
AGCCAGGCCG AGGAAACCGG CAGCGGCCAG CGCGCCAGCG TCGGCTGGGA CGGCCAGGTC
TATTTCGAAG GATTGCAAAG CGACAACCAG CTACGCGTGG TCCGCCCCGA CGGCCGGGCC
TGCCAGGCAC GCTTCCGCCT GGATACGCGC AAACCCACCG TCAGCCAGGT CGGCCCGCTG
ACCTGCTCGG CCCCGATCGG AGATACGCCA TGA
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| Protein sequence | MPRPCQRRSR RHRSLLIGLA LLSPVHATDY LAGLPSPQPA PSGGGNVLYY LELVINGRDS
GQVVPVNAAD GHYLLDAEAL REAGVRLPGN PAGQVAVDAL SEVRADYDSA SQQLHLQVPP
DWLPEQSFDD PGLVARTPAR SSLGALFNYD LYYSAPADGA TPWLSALLEQ RLFDGFGVIS
NTGVYTRYFG DADNLDSRYL RYDTYWLYND ERNMHSYQLG DYVNGALNWT TPVRMGGFRF
ARNFGVRPDL VTYPLLRFDG QAAVPSTVDL FINGYKASSA DLQPGPFAIS NVPYINGAGE
ATVVTTDAQG RQVATSLPFY VSNTLLARGL SDFDLSVGRL RGDYGLRNFS YADSAASGIY
RYGVSDRLTL STHAEAASDL RLLGIGGDIA VATFGTLSLA ASGSDGQGDS GQQYLLGYSY
YSRRLGLSLQ HIERSAGYGD LGTLDGEYQL SRRTDQATAS LTFDEQGTIG TGYFDIRARD
GSRTRLANLS YSRPIGSRSS FYLALNKDLD GDGYSALMQL VIPFDINGLL NIGVTRDSDR
RYSERVIWSR STPSQGGLGW NLGYGGGASR YQQADLTWRM QNVQLQGGLY GETGNYTRWA
DLSGSLVWMD NAVFASNRIN DAFVLVSTKG YPQVPIRYEN QLMGSTDDNG HLLVPWVAAY
YPAKFQIEPL DLPANVSAPE VEQRVAVRQG SGLLLDFPIR AVVAASISLV DERGEPLPLG
SQAEETGSGQ RASVGWDGQV YFEGLQSDNQ LRVVRPDGRA CQARFRLDTR KPTVSQVGPL
TCSAPIGDTP
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