Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5246 |
Symbol | |
ID | 5356759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5401287 |
End bp | 5403353 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640814292 |
Product | hypothetical protein |
Protein accession | YP_001350578 |
Protein GI | 152986688 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.526555 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAATA ACAATAGCCT GCTACGTCAC CTCGCCTGGC TGGTGGTGGC GATCGTGGGC GCCGCGGCCC TGGGCGTCGT CGCCCTGCGT CGCGGCGAAG CGATCAATGC CTTGTGGATC GTGGTCGCGG CGGTGGCCAT CTACCTGGTC GCCTACCGCT ACTACAGCCT GTTCATCGCC AGCAAGGTGA TGCAACTGGA CCCCAACCGC GCGACCCCCG CGGTGCTCAA CAACGATGGC CTGGACTACG TCCCGACCAA CAAGCACATC CTCTTCGGTC ACCATTTCGC CGCCATCGCC GGCGCCGGCC CGCTGGTCGG CCCGGTGCTC GCCGCACAGA TGGGCTACCT GCCCGGCACG CTCTGGCTGA TCGCTGGCGT AGTCCTCGCC GGCGCGGTGC AGGACTTCAT GGTCCTGTTC ATTTCCAGCC GGCGCAACGG CCGCTCGCTG GGCGAGCTGG TGCGCGAGGA AATGGGCCAG GTGGCCGGCA CCATCGCGCT GTTCGGCGCC TTCCTGATCA TGATCATCAT CCTCGCGGTG CTCGCGCTGA TCGTGGTGAA GGCCCTGGCC GACAGCCCGT GGGGCATGTT CACCGTGCTC GCGACCATCC CGATCGCGCT GTTCATGGGC GTCTACATGC GCTTCATCCG GCCCGGCCGG ATCGGCGAGA TCTCGATCAT CGGCGTGCTC CTCCTGCTCG GCTCGATCTG GCTCGGCGGC CAGGTGGCGG CCAGCCCGGA ATGGGCGCCG CACTTCACCT TCAGCGGGAT CCAGATCACC TGGATGCTGA TCGGCTACGG CGCCGTCGCC TCGGTGCTGC CGGTATGGCT GCTGCTGGCG CCGCGCGACT ATCTGTCGAC CTTCCTCAAG ATCGGCACCA TCATCGGCCT GGCGATCGGC ATCCTGATCG TCATGCCGGA ACTGAAGATG CCGGCCCTGA CCCAGTTCAC CGACGGCACC GGCCCGGTCT GGAAGGGCAG CCTGTTCCCG TTCCTGTTCA TCACCATCGC CTGCGGCGCG GTGTCCGGCT TCCACGCGCT GATCTCCTCG GGGACCACGC CGAAGCTGCT CAACCGCGAG CCCGATGCCC GCTACATCGG CTACGGCGGC ATGCTGATGG AATCCTTCGT GGCGATCATG GCGATGGTTG CCGCCTCGGT GATCGAGCCG GGCATCTACT TCGCCATGAA CAGTCCGCCG GCGGTGGTCG GCGCCGACGT CAACGCGGTG GCCGCGACCG TCAGCAGTTG GGGCTTCGCC ATCACCCCGG ACCAGCTCAC CCAGACCGCC AGGGACATCG GCGAGACCAC CATCCTGGCC CGCGCCGGCG GCGCGCCGAC CCTGGCGGTG GGCATCGCGC ACATCCTTCA CCAGGTGCTG CCGGGCGAGA ACACCATGGC CTTCTGGTAC CACTTCGCGA TTCTCTTCGA GGCGCTGTTC ATCCTCACCG CGGTGGATGC CGGCACCCGC GCCGGGCGCT TCATGTTGCA GGACCTGCTG GGCAACTTCG TGCCGGCGCT GAAGAAGACC GAGTCGTGGA CCGCCAACAT CATCGGCACC GGCGGCTGCG TGGCGCTGTG GGGCTGGCTG CTGTACCAGG GCGTGGTCGA TCCGCTGGGC GGGATCAACA CCCTGTGGCC GCTGTTCGGC ATTTCCAACC AGATGCTCGC CGGCATCGCG CTGATGCTCG CCACCGTGGT CCTGATCAAG ATGAAGCGCC AGCAGTACGT CTGGGTGACC ATCCTGCCGG CCGCCTGGCT GCTGATCTGC ACCACCACCG CGGGCCTGAT CAAGATCTTC GACAGCAATC CGGCGGTCGG CTTCGTCGCC CTCGGCGAGA AGTACGCCAC CGCGCTGGAT GCCGGCCAGG TACTGGCTCC GGCCAAGGAT ATCGGCCAGA TGCAGCACGT GGTGCTGAAC GCCTACATCA ACGCCGGCCT GACCGTGCTG TTCCTGCTGG TGGTGTTCAG CGTACTGTTC TACGCCATCA AGGTCGGCAT CGCGGCCTGG GGCAAGAGCG AGCGGACCGA CAAGGAAACC CCGTTCCAGC CCATTCCCGA TGCCTGA
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Protein sequence | MNNNNSLLRH LAWLVVAIVG AAALGVVALR RGEAINALWI VVAAVAIYLV AYRYYSLFIA SKVMQLDPNR ATPAVLNNDG LDYVPTNKHI LFGHHFAAIA GAGPLVGPVL AAQMGYLPGT LWLIAGVVLA GAVQDFMVLF ISSRRNGRSL GELVREEMGQ VAGTIALFGA FLIMIIILAV LALIVVKALA DSPWGMFTVL ATIPIALFMG VYMRFIRPGR IGEISIIGVL LLLGSIWLGG QVAASPEWAP HFTFSGIQIT WMLIGYGAVA SVLPVWLLLA PRDYLSTFLK IGTIIGLAIG ILIVMPELKM PALTQFTDGT GPVWKGSLFP FLFITIACGA VSGFHALISS GTTPKLLNRE PDARYIGYGG MLMESFVAIM AMVAASVIEP GIYFAMNSPP AVVGADVNAV AATVSSWGFA ITPDQLTQTA RDIGETTILA RAGGAPTLAV GIAHILHQVL PGENTMAFWY HFAILFEALF ILTAVDAGTR AGRFMLQDLL GNFVPALKKT ESWTANIIGT GGCVALWGWL LYQGVVDPLG GINTLWPLFG ISNQMLAGIA LMLATVVLIK MKRQQYVWVT ILPAAWLLIC TTTAGLIKIF DSNPAVGFVA LGEKYATALD AGQVLAPAKD IGQMQHVVLN AYINAGLTVL FLLVVFSVLF YAIKVGIAAW GKSERTDKET PFQPIPDA
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