Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5234 |
Symbol | |
ID | 5357245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 5383679 |
End bp | 5384392 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640814280 |
Product | ABC transporter ATP-binding protein |
Protein accession | YP_001350566 |
Protein GI | 152987765 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACAA CAAACAAGCA CGAATCATTG ATCTCCCTGC GGGGAATCGG CAAGGGCTAT CTCCTGGGGG GGCAGCCACT GCAGATACTG AAAGACGTCT GCCTGGACAT CTTTCCCGGT GAAAGTTGCG CGATCGTCGG CGCGTCGGGC TCGGGCAAGA GCACCCTGCT GAATATCCTC GGCCTGCTCG ACCGGCCGGA CAGCGGCGCC TATCGATTCG CCGAACACGA CATCTTCAGG GTCGACGAAG ACCAGTTGGC GGCGATCCGC AACCGCCTGA TCGGTTTCGT CTTCCAGAGT TTCAACCTGC TGCCGCGCCT GAGCGCGCTG GAGAACGTGG CGCTGCCGCT GGGCTATCGT GGCATGCCGC GCCGCGAGGC GTTGGAGCGC GCCGCGGCGA TGCTCGCCCA GGTCGGCCTC GCCGAGCGCG CCGGGCATCG CCCGGCGGAC CTCTCCGGCG GCCAGCGGCA GCGTGTCGCC ATCGCCCGCG CGCTGGTCGG CGAGCCCGCG CTGATCCTCG CCGACGAACC GACCGGCAAC CTCGACGCGA GCACCGCGAA GGAAGTGCTG GAACTGCTCC TGGCGCTCAA CCGCGAACGC CAGGTGACCC TGGTGGTGGT CACCCACGAT CCCGGCCTGG CCGCCCGTCT CGGGCGCCAG CTGACGGTGC GCCATGGCGA GATCCACGAG GAACTGGCGG AGACTTGCCG GTGA
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Protein sequence | MPTTNKHESL ISLRGIGKGY LLGGQPLQIL KDVCLDIFPG ESCAIVGASG SGKSTLLNIL GLLDRPDSGA YRFAEHDIFR VDEDQLAAIR NRLIGFVFQS FNLLPRLSAL ENVALPLGYR GMPRREALER AAAMLAQVGL AERAGHRPAD LSGGQRQRVA IARALVGEPA LILADEPTGN LDASTAKEVL ELLLALNRER QVTLVVVTHD PGLAARLGRQ LTVRHGEIHE ELAETCR
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