Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_5209 |
Symbol | ispB |
ID | 5357544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 5355650 |
End bp | 5356618 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640814255 |
Product | octaprenyl-diphosphate synthase |
Protein accession | YP_001350541 |
Protein GI | 152985492 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.465308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCCC AGGCCTTCTA CCGCGTGGTG GCGGAAGATT TCACCGCCGT CGACGGGATC ATCCGTCGCC AACTCACCTC TCGCGTTCCC CTGGTGGAAA AGATCGGCGA CTACATCATC TCCGCCGGTG GCAAGCGCCT GCGCCCGCTG CTGGTCCTGC TCGCCGGCAA GACCCTGGGC TACAAGGGCG ACGATCTGTG CCTGCTGGCG GCCACCATCG AGTTCCTGCA CACCTCCACC CTGCTCCACG ACGACGTGGT CGACGCCTCC GGCCTGCGCC GCGGCCGCTC CACCGCCAAC GCCCTGTGGG GCAACGCGCC GAGCGTGCTG GTGGGCGATT TCCTCTATGC CCGCTCCTTC GAAATGATGG TCGAACTCGG CTCAATGCCG GTCATGCGCA TCATCTCCCA GGCCACCCGG GTGATCGCCG AGGGCGAAGT GCTGCAACTG TCCAAGGTGC GCGACGCCAG CACCACAGAA GAGACCTACA TGGAAGTCAT CCGCGGCAAG ACCGCGATGC TCTTCGAGGC CTCGACCCAT AGCGCCGCCG CGCTGTGCCG GGCCGGCGAG GAACAGGCCG AGGCGCTGCG CCGCTTCGGC GACTACCTGG GAATCGCCTT CCAGCTGGTC GACGACCTGC TCGACTACCG CGGCGACGCC GCCACCCTGG GCAAGAACGT CGGCGACGAC CTCGCCGAGG GCAAACCGAC CCTGCCGCTG ATCGTCACCA TGCGCGACGG TACCGAGGAA CAGGCGGCGC TGGTGCGCAA GGCCATCCAG CAAGGCGGCA GCCAGGACCT GGAGAGTGTC TGCGCGGCCG TCGAGGCCGC TGGCGCCCTG GACTACACCG CCAACCTGGC CCGCGACTAC GCGGCGCGCG CCATCGCCTG CCTGGAAAGC CTGCCGGACA ACGAGTACCG CGCCGCCCTG GTCGAACTCA GCGAATTCGC GGTCGCCCGC ACCCACTGA
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Protein sequence | MQPQAFYRVV AEDFTAVDGI IRRQLTSRVP LVEKIGDYII SAGGKRLRPL LVLLAGKTLG YKGDDLCLLA ATIEFLHTST LLHDDVVDAS GLRRGRSTAN ALWGNAPSVL VGDFLYARSF EMMVELGSMP VMRIISQATR VIAEGEVLQL SKVRDASTTE ETYMEVIRGK TAMLFEASTH SAAALCRAGE EQAEALRRFG DYLGIAFQLV DDLLDYRGDA ATLGKNVGDD LAEGKPTLPL IVTMRDGTEE QAALVRKAIQ QGGSQDLESV CAAVEAAGAL DYTANLARDY AARAIACLES LPDNEYRAAL VELSEFAVAR TH
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