| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5118 |
|---|
| Symbol | |
|---|
| ID | 5358665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5267768 |
|---|
| End bp | 5268679 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640814164 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_001350454 |
|---|
| Protein GI | 152984270 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TGCACAACGC TCCCGCCAGC GACCCGAGCC TGGTCTACCC ATCCCCGCTG
AAGGAATTCT GGCAAGCCTT TACCCGGAAC AAAGGTGCCG TCGGCGGCCT GCTGTTCATG
CTGCTGATCG TGTTCTGCGC GCTGTTCGCC CCCTGGGTCG CGCCCTACGA TCCGAGCGAA
CAGTTCCGCG ACTTCCTGCT GACCCCGCCG TCCTGGCTGG AGGGCGGCCA GGCGCGTTTC
CTGCTCGGCA CCGACGAACT GGGCCGTGAC CTGCTCTCGC GGCTGATCCA CGGCGCCCGC
CTGTCGCTGC TGATCGGCCT GTCCTCGGTG GTGATCTCGC TGATCCCCGG CATCCTCCTC
GGCCTGCTCG CCGGCTTCTC GCCGAACCGC GCCGGGCCGC TGATCATGCG CCTGATGGAC
ATCATGCTGG CGCTGCCGTC GCTGCTGCTG GCGGTGGCCA TCGTGGCGAT CCTCGGCCCG
GGCCTGATCA ACACCGTGAT CGCCATCGCC ATCGTCTCGC TGCCAGCCTA CGTGCGCCTG
ACCCGCGCCG CGGTGATGAC CGAGCTCAAC CGCGACTACG TCACCGCCTC GCGCCTGGCC
GGCGCCGGCA CCCTGCGCCT GATGTTCGTC TGCGTGCTGC CGAACTGCAT GGCGCCGCTG
ATCGTCCAGG CCACCCTGAG CTTCTCCTCG GCAATCCTCG ACGCCGCCGC CCTGGGCTTC
CTCGGCCTCG GCGTGCAACC GCCGACCCCC GAGTGGGGCA CCATGCTCGC CTCCGCCCGC
GACTACATCG AGCGCGCCTG GTGGGTGGTC AGCCTGCCCG GCCTGACCAT CCTGCTCAGC
GTGCTGGCGA TCAACCTGAT GGGCGACGGC CTGCGCGACG CCCTCGACCC GAAACTGAAG
AACGCGGCAT GA
|
|---|
| Protein sequence | MNAMHNAPAS DPSLVYPSPL KEFWQAFTRN KGAVGGLLFM LLIVFCALFA PWVAPYDPSE
QFRDFLLTPP SWLEGGQARF LLGTDELGRD LLSRLIHGAR LSLLIGLSSV VISLIPGILL
GLLAGFSPNR AGPLIMRLMD IMLALPSLLL AVAIVAILGP GLINTVIAIA IVSLPAYVRL
TRAAVMTELN RDYVTASRLA GAGTLRLMFV CVLPNCMAPL IVQATLSFSS AILDAAALGF
LGLGVQPPTP EWGTMLASAR DYIERAWWVV SLPGLTILLS VLAINLMGDG LRDALDPKLK
NAA
|
|---|
| |