| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5040 |
|---|
| Symbol | |
|---|
| ID | 5353690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5191294 |
|---|
| End bp | 5192409 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640814086 |
|---|
| Product | prophage CP-933T integrase |
|---|
| Protein accession | YP_001350376 |
|---|
| Protein GI | 152987232 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.530892 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCGATCA AGAAGCTGGA TAATGGGGAA TGGCTGGTGG ACTGCCGTCC GGATGGTCGT
GACGGTCCAC GAATTCGTCG CAAGGTGAAG TCAAAGAACG AAGCCATGCA CCTGGAGCGT
CGAATCATGG GCGACGGCTC CAAGGGCGAG TTTGAGAAGA AGCCGAAACG CGACGAACGC
CGCCTGAGTG AACTGGTGGG GCTGTGGTTC ACCATGCACG GCAACACCTT AAAGCAAGGC
GACAAGCGAC GCCGGGAAAT GCTGACCACT GTGGCGCGGA TCGGCGACCC CATGGTTTGC
ACCTTCACCG CCGAGATGTT TGCCGACTAC CGTGCTGCCC GGATTGCAGG GAAGTGGGGG
CGGCTCAAAA CTGGGTCAGG CAAGAAGAAA GGGCAGGCGG CCAAGCCTGT AGGTGCCAAG
ACGTTGAACC ACGAACTGGT GCACCTGCGG GCCATGTTCA ATGAGCTGGA GCGTCTGGAG
AAGTGGACAG GTGAGAACCC GTTGGCGAAG GTTCGAGCGC TCAAGCAGGA CGAGACGGAA
ATGGGCTACC TGAGTCGGGA ACAGATCCCG CTTTTGCTGG CCAAGCTGGA TCAACACCCG
TCCACGGTTG GCATGGTTGC CCGGGTCTGC TTAGCCACTG GTGCCAGGTG GTCCGAAGCA
ATGAATCTGA CACCTCTGCA GGTGCGGGAT GGTCGAATCC ACTTCGTCCG CACGAAGTCG
GCAAGAAACC GCGCAGTGCC GATTTCTGCC GAGCTGCAGA AGTCGCTTGA GGGGGCGCTC
CCCTGGAGAT CGTCCTACTC GGCGACTTAC AAGGCGTTCG AGCTGGCGGT GGCCGAACTG
GATCTGCAAC TGCCGAAAGG GCAACTGACC CATGTGCTGC GCCATACCTT CGCAAGTCAT
TACATGATGA ACGGTGGTGA CATCCTGACC CTGCAGCGCG TGCTGGGCCA CGCGACTCTC
CAGATGACGA TGCGCTATGC ACATTTCAGC CCCGGACACT TGGCCGAAGT CGTCAACCTG
AACCCATTGG CTCAGGGGTG TGGACGTTTC GTGGACGCTG AAAAGGAATG CGAATCTGGT
GTGGACGCAC AGGGTCAGGC TGTAGCCCAG GTGTGA
|
|---|
| Protein sequence | MSIKKLDNGE WLVDCRPDGR DGPRIRRKVK SKNEAMHLER RIMGDGSKGE FEKKPKRDER
RLSELVGLWF TMHGNTLKQG DKRRREMLTT VARIGDPMVC TFTAEMFADY RAARIAGKWG
RLKTGSGKKK GQAAKPVGAK TLNHELVHLR AMFNELERLE KWTGENPLAK VRALKQDETE
MGYLSREQIP LLLAKLDQHP STVGMVARVC LATGARWSEA MNLTPLQVRD GRIHFVRTKS
ARNRAVPISA ELQKSLEGAL PWRSSYSATY KAFELAVAEL DLQLPKGQLT HVLRHTFASH
YMMNGGDILT LQRVLGHATL QMTMRYAHFS PGHLAEVVNL NPLAQGCGRF VDAEKECESG
VDAQGQAVAQ V
|
|---|
| |