| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4982 |
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| Symbol | ddl |
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| ID | 5354590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5137651 |
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| End bp | 5138610 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640814028 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001350318 |
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| Protein GI | 152988032 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.380222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTTA GCCTCGATAG CCTGCTGAAC GGCACCCAGG ATCCCAGGGC CTTCGGTCGC
GTCGCCGTGC TGTTCGGCGG CAAGAGCGCC GAGCGCGAGG TGTCGCTGAA GTCTGGCGCC
ATGGTCCTGC AATCCATGCT GGCCGCCGGG GTCGACGCCT TTGGCATCGA TGTCGGCGAC
GACCTGCTGC ATCGCCTGGT CGAGGAGAAG ATCGACCGTG CCTTCATCAT TCTCCATGGT
CGTGGCGGCG AGGATGGCAG CATGCAGGGC CTGCTCGAGT GCGCGGGCAT TCCCTACACC
GGCAGCGGCG TGCTGGCCTC GGCGCTGGCG ATGGACAAGC TGCGGACCAA GCGGGTCTGG
CGCAGCCTCG GCCTGCCGAC CCCGGACTAC GCGGTGCTGG GCAGCGAGGA TGATTGCCGC
GAAGCCGCGC AACGACTGGG TTTCCCGCTG ATCGTCAAGC CGGCCCATGA AGGTTCGAGC
ATCGGCATGG CCAAGGTCGG CGGGCTCGAC GAATTGATCG CGGCGTGGCG CGAGGCGGCC
CGCTACGACT CGCAGGTGCT GGTCGAGCAG TGGATCAGCG GCCCGGAATT CACCGTAGCG
ACCTTGCGCG GGCAGGTGCT GCCGGCGATC CGCCTGGGTA CGCCGCACAC CTTCTACGAC
TACGACGCCA AGTACCTGGC CAGCGATACC CGCTACCAGG TGCCCTGTGG CCTCGATGAG
GCCAAGGAAA GCGAGCTGAA GGATCTCACC GCGCGCGCCT GCGACGCACT GGGCATCCAG
GGCTGGGGAC GGGCCGACGT GATGCAGGAC GCCGAAGGGC GTTTCTGGCT GCTTGAAGTC
AACACCGCAC CGGGCATGAC CGACCACAGC CTGGTGCCCA TGGCCGCGCG CGCCGCCGGT
CTGGATTTCC AGCAACTGGT GCTGGCGATC CTGGCCGATA GCCGCGAGGC GAGGGGATAA
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| Protein sequence | MNLSLDSLLN GTQDPRAFGR VAVLFGGKSA EREVSLKSGA MVLQSMLAAG VDAFGIDVGD
DLLHRLVEEK IDRAFIILHG RGGEDGSMQG LLECAGIPYT GSGVLASALA MDKLRTKRVW
RSLGLPTPDY AVLGSEDDCR EAAQRLGFPL IVKPAHEGSS IGMAKVGGLD ELIAAWREAA
RYDSQVLVEQ WISGPEFTVA TLRGQVLPAI RLGTPHTFYD YDAKYLASDT RYQVPCGLDE
AKESELKDLT ARACDALGIQ GWGRADVMQD AEGRFWLLEV NTAPGMTDHS LVPMAARAAG
LDFQQLVLAI LADSREARG
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