| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4943 |
|---|
| Symbol | |
|---|
| ID | 5359713 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 5097303 |
|---|
| End bp | 5098430 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640813989 |
|---|
| Product | RND efflux membrane fusion protein precursor |
|---|
| Protein accession | YP_001350279 |
|---|
| Protein GI | 152985683 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTCCGCC GCATGTTGAT CATGCTCGCC GCAGTGATCG CCGTGGTGGC GATTCTCGCC
GGCTATAAGG TCTATTCCAT TCGTCAGCAG ATCGCGCTTT TCAGCGCGCC GAAACCACCG
ATCAGCGTGA CCGCCAGCCT GGCCGAGCGG CGACCGTGGC AAAGCCGCCT GCCGGCCATC
GGCAGCCTCA AGGCGTTCCA GGGCGTGACT CTCACCGCCG AGGTCTCCGG CACGGTACGC
GACGTGCTGT TCCTCTCCGG CGATCAGGTG CGGCTGGACC AGCCGCTGAT CCAGTTGGAA
AGCGACGTCG AGGAGGCCAC CCTGCGCACC GCCGAAGCCG ATCTCGGCCT GGCCAGGGCC
GAGTACCAGC GTGGCCGCGA GCTGATCGGC AGCAAGGCCA TCTCGAAAAG CGAGTTCGAT
CGCCTCGCCG CACAGTGGGC GAAGACCAGC GCCACCGTCG CCGAACTCAA GGCGGCACTG
GCGAAGAAGC GCCTGCTCGC GCCCTTCGCC GGGACCATCG GCATCCGCCA GGTGGACGTC
GGCGACTATG TCTCGCCCGG CACGCCGATC GCCACCTTGC AGGACCTGTC CACCCTGCTG
CTGGACTTCC ACCTGCCGGA GCAGGATTTC CCCCTGCTCA GCCGCGGCCA GGCGGTGAGG
GTCCGGGTCG CCGCCTACCC CGGCCAGGTG TTCGACGCCG AGATCGCCGC CATCAACCCC
AAGGTCGACA ATGCAACCCG CAACCTACAG GTCCGCGCCG CCCTGGAGAA CCCGGGCGGC
AAGCTGCTGC CGGGGATGTT CGCCAACCTG GAGGTGATGC TGCCGGGCGA GGAACAACGC
ATCGTGGTGC CGGAGACGGC GATCACCTTC ACCCTCTATG GCGACTCGAT CTACGTGGTC
GGGCAGAAGA AGGACGGACA GGGCCAGGCT TCGAAGGACG ACAAGGGCCA GCCGCAACTG
GTCGTCGAGC GCCGCTTCGT CAAGGTCGGC GAGCGCCGCG AAGGCCAGGC GGTGGTGCTC
GAAGGCCTGC GGGACGGTGA GCAGGTGGTC ACCTCCGGGC AACTGAAGCT CGACAACGGC
GCCGCGGTGG CCATCGTCGC CGAGCGGGAC CTCCAGCAAG GGCACTGA
|
|---|
| Protein sequence | MLRRMLIMLA AVIAVVAILA GYKVYSIRQQ IALFSAPKPP ISVTASLAER RPWQSRLPAI
GSLKAFQGVT LTAEVSGTVR DVLFLSGDQV RLDQPLIQLE SDVEEATLRT AEADLGLARA
EYQRGRELIG SKAISKSEFD RLAAQWAKTS ATVAELKAAL AKKRLLAPFA GTIGIRQVDV
GDYVSPGTPI ATLQDLSTLL LDFHLPEQDF PLLSRGQAVR VRVAAYPGQV FDAEIAAINP
KVDNATRNLQ VRAALENPGG KLLPGMFANL EVMLPGEEQR IVVPETAITF TLYGDSIYVV
GQKKDGQGQA SKDDKGQPQL VVERRFVKVG ERREGQAVVL EGLRDGEQVV TSGQLKLDNG
AAVAIVAERD LQQGH
|
|---|
| |