| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4860 |
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| Symbol | |
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| ID | 5359474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 5010884 |
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| End bp | 5013655 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640813906 |
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| Product | sensory box histidine kinase |
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| Protein accession | YP_001350196 |
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| Protein GI | 152989732 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.186334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGAGT TTTCCCGTTC GTCTTCCGCC GCGGACGCCT GCGAGGCGCG CGAGCCGCTT
TCGCCGGAAG GCGCCGGCCA ATGGGCGGGC GCGCTGAAGA GCTGGGACCT GTGCCTGGAG
CTGGACGAGC AGGACCGGGT GATCCGCGTC GGCGGTCGCC AGGCCTATCG CCTGCAGCGC
CCCCACGGTC GTGGCGACGG ACCGCGGCCG CTCGCCGAGT ACCTGGAACG GCGCGCTCCC
GGCGCGCCGG CGCTGGCGGC CCTGCGCCGC GGCGAACGGC TCGACCTGGC CTTGCGCAGC
GATGCGGCGG CGCCCTTCAC CTGTCGTTTC CAGCCGATGC AGCCGCTCGA TGGGTTGGGG
CGTTCATTGC TGCTGGGCAT GGATATCTCC GACCTGAACT GGCAGTCCGA CAGCCAGCTG
CATCAACTGC AGAGCCTGAG CCTGGGCAAG CTGGTCCTCT CGCGCCTGCG GCATGTCTCC
CTGGGCCATC TGGCGGAGGC GACCCAGGAT ATCCTCGAAT CGCTCTCCGG AGCCTTCCGG
ATGCAGGCGA TCGCCTTGCT GCTGGGGGAT GGCGACGGCG CCTGCTCGGT CTTCGCCAGC
CACGTCCGGC CCGGTAGCGA CAGCCTGCTG CGGCCCGGGC TGCATCTGGC CGATGGCGAG
CTGCGCGAGG AGCGTGGGGT ACGCCTGCTG CGCAGTGGCG ATGGCGCTTC GGCGCTGCTG
CGGCAGATCG GCGAGGAGGC TGTCTACCTG GTGCCGGCGG CCATGCGCGG CGGGCGCGTC
GGCGCCCTGC TGGTCAAGCC CGTCTCGCTG GAGCAGTTGG CCGAGGGGCC GGCGCCGCAG
GACTGGCAGT ATCTCGCGGA ACTGCTGGCG AACCAGGTGG CGGATCGCTG CGAACTCCAC
GCGCAGCGCG ACAGCGCCCG CAAGCTGGGC CTGCTGCAGG AGATGATCGG TGGCGGTTGG
TGGTACTACC GGGCGGAGCA GGAGTTGTTC GAGCTGTCGC CGGCGCTGCT GCAGAGCCTG
GGCCTGACCG GCGAGCAGCG TCGCGTGCCG CTGGAGCAAC TGCAGAACCT GTTGCAGCCG
GCCGACGCCG ACGAGTTGGG CCTGCGCCTG CGCGCCAGCC TGCGCAGTGG CCAGGCGCTG
GCCCAGGATC TCTGCCTGCG CCAGCCGGAC AGCCGTGGAG AGCGCCGCTG GCTGCGCATC
GAAGGCCGCC CGCAGGGGGG CGGCAGTGCG CCGGGGCTGT CCGGCGTCCT CCTCGACATC
AGTGAAGGCC GGCGCCAGGA GGAGCACGCC CAGGCGGCCC ACGCGCGGTT GCGCAACCTG
ATCGATAGCG CGCCGGTGGT GATCTATGTC CAGCGGGTCG AGCAGGGGCG GCTGGTGCCG
GAGTTCTACA GCGAGAGCGC GAGCAACCTG CTCGGTCTCG ACCTGCAGGG GCAGAGCTGG
CAAGCGCTGG CGGAGCGCGT ACATCCGGAC GACCTGGAGA CCTTCTTCGC CCGCGGACGC
GAGTTGCTGC GCGAGGGGCG GGTGAAGACC CGCTACCGTC TCGCCGATGG CCAGGGCCAG
TGGCATTGGC TATATGACGA AGCCAAGCTG CTGCGTGACG CCCAGGGGTT GCCCAGCGAA
GCGGTCGGCC TGTGGCTGGA CGTCACCGAG CAGCACCTGG CGGCGCAGCG CATCGCCGCG
AGCGAGGAGC GCTACCGGGC GCTGGTGGAG GATTCGCCGG CGCTGATCTG CCGCTATACC
GCCGACCTGG TGCTCACCTA CGTGAACCGG ACGTTCGCCG ACTGCCTTGC GGCGCACCCG
GAGGAACTGG TCGGCCGGCG GCTCGACGAG TGGCTGGCGG CGGAGGACGG CAGCGCCCTG
CGGGCGCGGT TGCTGGATGC GCCACGGGAG GGCGCGATCG AGGTCTCCGA GGTACGCTTC
AACCTGCCGG GACAGCGCTT CCTCTGGCTG GTGTGGGCCG AGCGGCCGCT CTACGATGGC
CGCGGCCAGC TACTCGAGGT GCAGGCAGTC GGGCGCGACA ACACCCCGGT GCGCAGGGCC
CAGCAGCAAC TGGCGCAGGG CGCCAAGATG GCCAGCCTGG GAGAAATGGT CAGCGGCCTG
GCCCACGAGG TGAAGCAGCC GCTGCACGTG CTGCGCATGA CCCTGTTCAA CATGCGCCAG
CGGATGAACA ACGTCGGCCT CGACGAAAGC TATCTGGACG AGAAGCTGGA ACGCATGGAC
GCCCAGGTCA TGCGCGTCGA CCGACTGGTC AGCCACCTCG GCGTGTTCAG CCGCAAATCG
GCGGTCGAGG CGCTGCCGTT CGATCCCTAT GCCGCCTTCG AAGGTGCCCT CGGCCTGCTC
GGCGAAGGCC TGCAGCAGCA CGCCATCCAG GTCGAATGCC GGGCGCCGGC GCAGCGGGTG
GTGGTCAGGG GGCATGCGGA CCAGCTCGAA CAGGTGATCA TCAACCTGCT CGCCAACGCC
CGCGATGCCC TGCTCGGCAA CCCCGGACTG GCCGAACGGC GCATCGTCCT GGCGCAGGAG
GCCTGCCGCG AGCCGGGCTG GGTGGAGCTG CACGTGCGCG ACAACGCCGG CGGCATCGAG
CCGGCCCTGC TGGAGCGGAT CTTCGAACCC TTCTTCACCA CCAAGGCGGA AGGCAAGGGT
ACCGGCCTGG GGCTTTCGGT GAGCCACGAC CTGGTGCGCA ACATGGGCGG CAGCCTGGCG
GCGAGCAACC TGCCGGAAGG GGCTCTGTTC GTGATACGCC TGCCGCTGGC GCCGCCGTCC
GGCGAGGCGT AG
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| Protein sequence | MFEFSRSSSA ADACEAREPL SPEGAGQWAG ALKSWDLCLE LDEQDRVIRV GGRQAYRLQR
PHGRGDGPRP LAEYLERRAP GAPALAALRR GERLDLALRS DAAAPFTCRF QPMQPLDGLG
RSLLLGMDIS DLNWQSDSQL HQLQSLSLGK LVLSRLRHVS LGHLAEATQD ILESLSGAFR
MQAIALLLGD GDGACSVFAS HVRPGSDSLL RPGLHLADGE LREERGVRLL RSGDGASALL
RQIGEEAVYL VPAAMRGGRV GALLVKPVSL EQLAEGPAPQ DWQYLAELLA NQVADRCELH
AQRDSARKLG LLQEMIGGGW WYYRAEQELF ELSPALLQSL GLTGEQRRVP LEQLQNLLQP
ADADELGLRL RASLRSGQAL AQDLCLRQPD SRGERRWLRI EGRPQGGGSA PGLSGVLLDI
SEGRRQEEHA QAAHARLRNL IDSAPVVIYV QRVEQGRLVP EFYSESASNL LGLDLQGQSW
QALAERVHPD DLETFFARGR ELLREGRVKT RYRLADGQGQ WHWLYDEAKL LRDAQGLPSE
AVGLWLDVTE QHLAAQRIAA SEERYRALVE DSPALICRYT ADLVLTYVNR TFADCLAAHP
EELVGRRLDE WLAAEDGSAL RARLLDAPRE GAIEVSEVRF NLPGQRFLWL VWAERPLYDG
RGQLLEVQAV GRDNTPVRRA QQQLAQGAKM ASLGEMVSGL AHEVKQPLHV LRMTLFNMRQ
RMNNVGLDES YLDEKLERMD AQVMRVDRLV SHLGVFSRKS AVEALPFDPY AAFEGALGLL
GEGLQQHAIQ VECRAPAQRV VVRGHADQLE QVIINLLANA RDALLGNPGL AERRIVLAQE
ACREPGWVEL HVRDNAGGIE PALLERIFEP FFTTKAEGKG TGLGLSVSHD LVRNMGGSLA
ASNLPEGALF VIRLPLAPPS GEA
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