Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4851 |
Symbol | recB |
ID | 5354509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4995789 |
End bp | 4999523 |
Gene Length | 3735 bp |
Protein Length | 1244 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640813897 |
Product | exodeoxyribonuclease V beta chain |
Protein accession | YP_001350187 |
Protein GI | 152984144 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAC AGATGCCCGC GCCCCTCGAT CCGCTGGATT TCCCGTTGCA CGGCAGCCGC CTGATCGAGG CCAGCGCCGG GACCGGCAAG ACCTTCACCA TCGCCCTGCT GTATGTCCGC CTGGTCCTCG ACCATGGTGG CGAGAACGCC TTCGGCCGGC CGCTGAGTCC GCCGGAAATC CTCGTGGTGA CCTTCACCGA TGCGGCGACC CGCGAGCTCC GCGAGCGTAT CCGCAGTCGC CTGACCGAAG CGGCGCGCTG CTTCGCCGAG CCGCAGGCGA GCCACGACGG CCTGCTGGTC GCGCTGCGCC AGCAATATCC CGCCGAACGC TGGCCGGGCT GCGCGCGCCT GTTGCGGCTG GCCGCCGAGT GGATGGACGA GGCAGCGGTG TCGACCATCC ATAGCTGGTG CTACCGGATG CTGCGCGAAC ACGCCTTCGA CAGCGGCAGC CTGTTCACCC AGAACCTGGA AACCGACCAG AGCGAATTGC TCGCCGAAGT GGTGCGGGAC TACTGGCGGC GCAATTTCTA CGGCCTGACG GCGCAGGCGG CGCAAGCCGT GGCCAGCTGC TACAGCGGGC CGGAGGCGCT GGGCAAGGCC TTGCAGCCGT TGTTGGCGCG GCAGGACGCC GACTTCCGCT ACGCCGACCA GGCGCTGAGT GCGCCCGAGT CGCTGGCAGC CTTGCTGGAG CGGGGCGGCG ACTGGTATCG CCAGCTCGAC CAACTGGACG CGCAAGCCCG CGCCGCCTGG CGCGCAGCGC GCGTCGAACT GGAAACGCTG CTGCGCGAGC TGCGTCCCTG CCTGAACGGC AACAGCTATC GCGGCAAGGA CAGCGACGAG ACCTTCGACG CCTGGCTGCA GGCATTGGCG GACTGGAGCG AGGGCGGCGA CCAGCCGGCC AACCTGGGCA AGTTCGGCCA GACCCGGATC AAGCTTACCG CCAAGCGTGC CGCGCCCGAG CATCCCGCGC TGCGGGCCAT CGACGCCTGG GCCGCGCATC AGGAAGAGCG TCCCGATATC GCTCCCCACC TGTTGTTGCA CGCGCTGGGC GAGGTCGGCC GCGAACTTGA GGTCGAGAAG CAGCGGCGTG CCGAGATCGG CTTCGACGAC CTGCTCACCC GTCTTGACCG CGCCCTGCAA GGTCCCGGTG GCGAGCGCCT GGCGCAGTTG ATCCGCGAAC AGTTCCCGGT GGCGTTGATC GATGAATTCC AGGACACCGA CCCGGTGCAG TACCGGATCT TCGAACGCAT CTACCGGATC GCCGCCGATC CCGCCGGGCC CCAGGCGCGG GAGACCGGCC TGTTCATGAT CGGCGACCCC AAGCAGGCGA TCTATGCCTT CCGCGGCGCC GACATCCATA CCTACCTGCG TGCGCGGGAA GCCACTCGCG GCCGCCACTA CACCCTCGGC AGGAACTTCC GCTCGACCGC CGCCATGGTG GCGGCCGCCA ACCGCTGTTT CGCCTTCGCC GAAGAGCATC CGCGCGGCGC CTTTCGTTTC GCCCGCGAGG GGGTGGAGAA TCCGCTGCCG TTCCATGCGG TCGATGCCCA GGGGCGCGCC GAACGCCTGT CGATCGATGG TGCCGAGGCG CCGGCGATGA CGTTCTGGTG CCTCGACGCC GAAGCCGGCG TGCTCGGCTC CGCGGCGTAT CGCCAGGAAA TGGCCGAGCG TAGCGCCAGT GCCATCCGCC GCTGGCTGAG CCTGGCCGAC CTGGGCCGCG CCGGCTTCGC CGACGAACAG GGCGGCTGGC GGGCGTTGCG CCCGGCGGAT ATCGCCATCC TCGTCCGCGG TCGCGCCGAG GCCGAGGCGA TCCGTAGCGC GTTGGCGGCG CGGCGTCTGG CCAGCGTCTA CCTGTCCGAC CGCGACTCGG TGTTCGACAG CCAGGAAGCC GCCGACCTGC TGCACTGGCT GCGCGCCTGC GCCGACCCGG GCGCCGATAC CCTGCTGCGG GTCGCCCTGG CCAGCCGCAG CCTGCACCTG GACTGGGCGA CCCTGGAGCG GCTGAACCAG GACGAACTGT TCTGGGAACG GATGGTCCTG CGCTTCCGCG ACTATCGTCG CCTCTGGCAG ACCCAGGGTG TGCTGCCGAT GCTGCGGCGC CTGCTCGCCG ACTTCGAGCT GCCGGCGCGC CTGCTGCGGC ATACCGACGG CGAGCGTAGC CTGACCAACC TGCTGCACCT GGCCGAATGG CTGCAACGCG CGGCGGTGGA GCTGGACGGC GAGCATGCGC TGGTCCGCCA CCTCGCCGAG CAGTTGCAGA GCCCCGGCAG CGAAGAGATC CTGCGCCTGG AAAGCGACGC CGACCTGATC AAGGTAGTGA CCATCCACAA ATCCAAGGGC CTGGAATATC CACTGGTACT GCTGCCCTTC ATCTGCAGTT GGAAGGAACT GGACGGCAAT AGCGGCGCAC CGGCCAGTTT CCACGAGGAC GGCATCCCGG GGCAGGTGGT CGAGCTGGCG CGGCGCAAGG AGCAGGCCGC ACGCGCCTAC GAGCAGGCCA ACGACGAGCG TCTCGGCGAG GACATGCGCC TGCTCTACGT GGCCCTGACC CGTGCGCGGC ACTCGGTGTG GCTGGGCATC GCGCCGCTGG TGGCGGGCAA CAGCCGATCA CCGGAACTGC ACAAGGGCGC CATGGGCTAC CTGCTCGCCG GCGGCGCCGC GATCAGCGGC GAGGGTCTTG CGAGCTGCCT CGCCGCGCTG CGTGGCGAAT GTGCGGGGAT CGTCGTCGAG CCGGCGCCGC CGGCGGATGC CGAACCCTAT GTGATGGGGC GCGGCGAGGC GCTCGGTCAG GCGCGCGAGA CCTGCCGCAG CAGCCGCGAG AAATGGTGGG TCGCCAGCTA TTCCGGCCTG CAGTTGCAGG CTTCCAGCGG GTTGGAGGAC GACGAGGCGG TCGCCGTCGC CGAGTCGCAG GAGCCGATCA GCGCCGAGGA AGCCACTTTC CAGGAAGAGG GCCGCTCCGC CGAGCAACCG CCGCCCGCCG TCGCCAGCGC GATGCGCGAC GACCTGCACC GCTTCCCGCG CGGCCCGGCG CCCGGCACCT TCCTCCACGG CCTGCTCGAG TGGGCCGGGC GCGAAGGCTT CGAGGCGGCC CGGGCGGATG CCCCGCGTCG CCGCGAGCTG ATCGCCCGGC GCTGCGAACT GCGTGGCTGG AAGGACTGGG CCGAACCGCT CGACCTGTGG CTGGAACAGT ATCTCGCCGA ACCGTTGCGC TGGCCCGGCG GCGAAGCCAG CCTGGCCGGG CTGCTCGCCT ACCAGGTGGA AATGGAGTTC TGGTTCGCCA GCCACCAGGT CCAGGCCGAG GCGATCGACG CCCTGGTCCG CCGCCATACC CTCGGCGGCG CGGCGCGCCC GGCGCTGGCG CCGACCCTGC TGAACGGCAT GTTCAAGGGC TTCGTCGATC TGGTCTTCGA GCACCAGGGG CGTTTCTACG TGGCCGACTA CAAGTCCAAC TGGCTGGGCG CCGACGACGG CGCCTACAGC CCGGAAGCGA TGGCCGCCGC GGTGCTGGAG AACCGCTACG ACCTGCAATA CGTCCTCTAC CTGCTGGCCC TGCACCGGCA GTTGCAGGCG CGCCTGCCCG ATTATGACTA CGACCGCCAC GTGGGTGGCG CCGTCTACCT GTTCCTCCGC GGCGCCCGCG CGGCGACCCA GGGCCTGCAT TTCGAACGAC CGCCGCGCGA ACTGATCGAG GACCTGGACG CTCTGTTCCG CGGCCAGCCG GGAGTCCCGC GATGA
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Protein sequence | MTAQMPAPLD PLDFPLHGSR LIEASAGTGK TFTIALLYVR LVLDHGGENA FGRPLSPPEI LVVTFTDAAT RELRERIRSR LTEAARCFAE PQASHDGLLV ALRQQYPAER WPGCARLLRL AAEWMDEAAV STIHSWCYRM LREHAFDSGS LFTQNLETDQ SELLAEVVRD YWRRNFYGLT AQAAQAVASC YSGPEALGKA LQPLLARQDA DFRYADQALS APESLAALLE RGGDWYRQLD QLDAQARAAW RAARVELETL LRELRPCLNG NSYRGKDSDE TFDAWLQALA DWSEGGDQPA NLGKFGQTRI KLTAKRAAPE HPALRAIDAW AAHQEERPDI APHLLLHALG EVGRELEVEK QRRAEIGFDD LLTRLDRALQ GPGGERLAQL IREQFPVALI DEFQDTDPVQ YRIFERIYRI AADPAGPQAR ETGLFMIGDP KQAIYAFRGA DIHTYLRARE ATRGRHYTLG RNFRSTAAMV AAANRCFAFA EEHPRGAFRF AREGVENPLP FHAVDAQGRA ERLSIDGAEA PAMTFWCLDA EAGVLGSAAY RQEMAERSAS AIRRWLSLAD LGRAGFADEQ GGWRALRPAD IAILVRGRAE AEAIRSALAA RRLASVYLSD RDSVFDSQEA ADLLHWLRAC ADPGADTLLR VALASRSLHL DWATLERLNQ DELFWERMVL RFRDYRRLWQ TQGVLPMLRR LLADFELPAR LLRHTDGERS LTNLLHLAEW LQRAAVELDG EHALVRHLAE QLQSPGSEEI LRLESDADLI KVVTIHKSKG LEYPLVLLPF ICSWKELDGN SGAPASFHED GIPGQVVELA RRKEQAARAY EQANDERLGE DMRLLYVALT RARHSVWLGI APLVAGNSRS PELHKGAMGY LLAGGAAISG EGLASCLAAL RGECAGIVVE PAPPADAEPY VMGRGEALGQ ARETCRSSRE KWWVASYSGL QLQASSGLED DEAVAVAESQ EPISAEEATF QEEGRSAEQP PPAVASAMRD DLHRFPRGPA PGTFLHGLLE WAGREGFEAA RADAPRRREL IARRCELRGW KDWAEPLDLW LEQYLAEPLR WPGGEASLAG LLAYQVEMEF WFASHQVQAE AIDALVRRHT LGGAARPALA PTLLNGMFKG FVDLVFEHQG RFYVADYKSN WLGADDGAYS PEAMAAAVLE NRYDLQYVLY LLALHRQLQA RLPDYDYDRH VGGAVYLFLR GARAATQGLH FERPPRELIE DLDALFRGQP GVPR
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