| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4803 |
|---|
| Symbol | |
|---|
| ID | 5353891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 4931476 |
|---|
| End bp | 4932378 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640813849 |
|---|
| Product | alpha-1,6-rhamnosyltransferase MigA |
|---|
| Protein accession | YP_001350144 |
|---|
| Protein GI | 152987920 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCAG AAGCCACTTC CAGCAAGCCC TCAGGCACGA CGGATACCCC CCTGGTCTCC
GTCGTCGCGC CCTGCTTCAA CGCGGAAAAG TACCTGGAAG AAGCCCTGCG GAGCATCTAT
GCGCAGGACT ACCCGAATTT CGAAGTGATC ATCGTCGACG ACGGTTCCAC CGACGCCAGC
TATGCCATGC TGGAACAGCT GCAGGCCAGC TACGGCTTCC AGCTCTACCG CCAGCGCAAC
CAAGGCGTCA GCGCCGCGCT GAACTTCGGC CTGCAGCATG CCCGCGGCGA CTACGTCGCC
ACTCCGGACC TGGACGACAT CATGCTGCCG CATTCGCTGA GCGTACGCGC CGAGTACCTC
GACCAGCACC CCGAGGTCGG CTGCGTCGGC GCCCTGGTCA TCTACATCGA CAGCGAAGGC
CAGGAAACCA AGCGGCAGAG CAGCAACCGC ATCCGCCAGC TGGACTTCGA CTACCTGCTC
GGCAACGCCT ATGTCTGCGG CGCCCCGGTG TCCCTCTACC GCATGGAAGC CCTGCGCGCC
GCCGGCTTCT ACGATCCGCA GATCAAGGTC CAGGACTTCC AGATGACCCT GCGCATCGCC
AGCCAGGGCT ACCAGATCCA CAAGCTGCCG GTGCTGGTCA CCCGCTACCG GCGCCACCCC
GACAACCTGT CGCGGCGCTA CAAGGTGCTG CTCGACGCCG ACCTGCGCAC CATCGAGCCC
TACCAGTCGC ATCCGGCCTA CGAGCGCGGC CGCACGGAGC TGGTCAACAA GGCCCTGAAA
TACGCCGTGG TATCGGACAA GAAGCATGCC TGGCAACTGC TCCGCTCGCT GCCCCTGCGG
CAGTGGAACC GCACCACCTT CCGCCGTCTG AAGCGCTTCC TGCTCCATCA CGAGACCACC
TGA
|
|---|
| Protein sequence | MIAEATSSKP SGTTDTPLVS VVAPCFNAEK YLEEALRSIY AQDYPNFEVI IVDDGSTDAS
YAMLEQLQAS YGFQLYRQRN QGVSAALNFG LQHARGDYVA TPDLDDIMLP HSLSVRAEYL
DQHPEVGCVG ALVIYIDSEG QETKRQSSNR IRQLDFDYLL GNAYVCGAPV SLYRMEALRA
AGFYDPQIKV QDFQMTLRIA SQGYQIHKLP VLVTRYRRHP DNLSRRYKVL LDADLRTIEP
YQSHPAYERG RTELVNKALK YAVVSDKKHA WQLLRSLPLR QWNRTTFRRL KRFLLHHETT
|
|---|
| |