Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4749 |
Symbol | rnc |
ID | 5359849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4882585 |
End bp | 4883274 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640813795 |
Product | ribonuclease III |
Protein accession | YP_001350091 |
Protein GI | 152986476 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.190764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTAATC CGCTGGACCG ACTCGAGCGC AAGCTCGGCT ATACCTTCAA AGACCAGGAC CTGATGGTCC TGGCCCTGAC CCATCGCAGC TACGCCGGGC GCAACAACGA GCGCCTGGAG TTCCTCGGTG ACGCCATTCT CAACTTCGTC ATCGGCGAGG CGCTGTTCCA CCACTTCCCG CAGGCCCGCG AAGGCCAGCT TTCGCGCCTG CGCGCACGGC TGGTCAAGGG CGAGACCCTG GCCCTGCTGG CGCGCGGCTT CGAGGTGGGC GACTACCTGC GCCTGGGCTC GGGTGAGCTG AAGAGCGGCG GTTTCCGCCG CGAGTCGATC CTCGCCGACG CGATGGAGGC CCTGATCGGC GCCATCTACC TGGACACCGG CATGGACTCC GCGCGCGAGC GGATCATCGC CTGGCTCGGG CCGCAGTTGC GCGAGCTGAC CCCGGTGGAT ACCAACAAGG ACCCCAAGAC CCGCCTGCAG GAGTTCCTGC AGTCGCGCGG CTGCGACCTG CCGCGCTACG AAGTGGTGGA TATCCAGGGC GAACCCCATT GCCGGACCTT CTTCGTCGAT TGCGAAGTGG CCCTGCTGAG CGACAAGACC CACGGGCATG GCGGCAGCCG CCGCATCGCC GAGCAGGTGG CCGCGGCCGC CGCGCTGGTG GCCCTGGGCG TGGAGAATGG CCATGACTGA
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Protein sequence | MSNPLDRLER KLGYTFKDQD LMVLALTHRS YAGRNNERLE FLGDAILNFV IGEALFHHFP QAREGQLSRL RARLVKGETL ALLARGFEVG DYLRLGSGEL KSGGFRRESI LADAMEALIG AIYLDTGMDS ARERIIAWLG PQLRELTPVD TNKDPKTRLQ EFLQSRGCDL PRYEVVDIQG EPHCRTFFVD CEVALLSDKT HGHGGSRRIA EQVAAAAALV ALGVENGHD
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