Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4729 |
Symbol | |
ID | 5355826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4856597 |
End bp | 4858012 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640813775 |
Product | amino acid permease |
Protein accession | YP_001350071 |
Protein GI | 152987233 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.735524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCTG TCGGCGAACA GAAGGTTCAA GACGGCTCCC TGAAGCGCGA GCTCGGTGAG CGACACATCC GCCTGATGGC GCTCGGCGCC TGTATCGGCG TCGGCCTGTT CCTGGGCTCG GCGAAGGCCA TCCAGATGGC CGGCCCGGCC ATCATGATCT CCTACATCCT CGGCGGCCTG GCGATCCTGG TGATCATGCG CGCCCTCGGC GAGATGGCGG TGCACAACCC GGTGGCCGGT TCCTTCAGCC AGTACGCCAA GGACTACCTG GGCCCGCTGG CGGGCTTCAT CACCGGCTGG AACTACTGGT TCCTCTGGCT GGTGACCTGT GTCGCCGAGA TCACCGCCGT CGCCGTCTAC ATGGGTATCT GGTTCCCCGA CGTGCCGCGC TGGATCTGGG CCCTGGCGGC CCTGGCGAGC ATGGGCACGA TCAACCTCAT CGCGGTGCGC GCCTTCGGCG AGTTCGAGTT CTGGTTCGCC CTGATCAAGA TCGTCACCAT CCTGGCGATG GTGGTGGTCG GCATCGGCAT GATCGCCTTC GGCTTCGGCA ACGACGGCAT CGCCACCGGC ATCTCCAACC TCTGGGCCCA CGGTGGCTTC ATGCCCAACG GCATCCAGGG CGTGCTGATG TCGCTGCAGA TGGTGATGTT CGCCTACCTC GGGGTGGAAA TGATCGGCCT CACCGCGGGC GAGGCGCGCA ACCCGACCAG GACCATTCCC AGCGCGATCA ACTCGGTGTT CTGGCGCATC CTGCTGTTCT ATGTCGGCTC GCTGTTCGTG ATCATGTCGC TCTACCCGTG GAACGAGATC GGCACCCAGG GCAGCCCCTT CGTCATGACC TTCGAGCGCA TGGGCATCAA GACCGCCGCC GGAATCATCA ACTTCGTGGT GATCACCGCC GCGCTGTCGT CCTGCAACGG CGGCATCTTC AGCACCGGGC GCATGCTCTA CAGCCTGGCC CAGCATCGCC AGGCCCCGGC CTTCTTCGGC AAGGCCTCGC GCAGCGGCGT ACCGCGCCGG GCGCTGATCC TGTCGATCCT GGCGCTGCTG CTGGGCGTGT TGCTGAACTA CCTGGTGCCG GAGAAGGTGT TCGTCTGGGT GACCTCCATC GCCACCTTCG GCGCGATCTG GACCTGGGCG ATGATCCTGC TGGCCCAGCT GCGCTTCCGC AGGACCCTGA GCCCGGCCGA GCGCGACAAG CTGCAATACC GCATGTGGCT GTACCCGGTC AGTTCCTACC TGGCGCTGGC GTTCCTGGTG ATGGTGGTGG TGCTCATGGC CTTCTTCGAG GACACCCGCA TCGCCCTGTA CATCGGCCCG CCGTTCATCC TGCTGCTGAC CGTCCTGTAC TACGCCTTCA ACCTGGCGCC GAAGGAACCT GCCGATGCCG GCGCGGTGAG CCGCGCGGCG TCCTGA
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Protein sequence | MSSVGEQKVQ DGSLKRELGE RHIRLMALGA CIGVGLFLGS AKAIQMAGPA IMISYILGGL AILVIMRALG EMAVHNPVAG SFSQYAKDYL GPLAGFITGW NYWFLWLVTC VAEITAVAVY MGIWFPDVPR WIWALAALAS MGTINLIAVR AFGEFEFWFA LIKIVTILAM VVVGIGMIAF GFGNDGIATG ISNLWAHGGF MPNGIQGVLM SLQMVMFAYL GVEMIGLTAG EARNPTRTIP SAINSVFWRI LLFYVGSLFV IMSLYPWNEI GTQGSPFVMT FERMGIKTAA GIINFVVITA ALSSCNGGIF STGRMLYSLA QHRQAPAFFG KASRSGVPRR ALILSILALL LGVLLNYLVP EKVFVWVTSI ATFGAIWTWA MILLAQLRFR RTLSPAERDK LQYRMWLYPV SSYLALAFLV MVVVLMAFFE DTRIALYIGP PFILLLTVLY YAFNLAPKEP ADAGAVSRAA S
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