Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4476 |
Symbol | |
ID | 5353836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 4610401 |
End bp | 4610931 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640813524 |
Product | type IV B pilus protein |
Protein accession | YP_001349826 |
Protein GI | 152984692 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACTA CGCAACGCAC CTCCCGTCCG ACGCAGGGCG GTTTCGTTTC CATCGAGATG ATCATCGTGC TGATCATCAT CGCCATCGGG GTCGGCCTGG GCCTGGCCGC AGCGGCTGGG ATGTTCAGTT CGTCCAACGC CAACGAGGAA CAGCGCAACA TCAGCGTCAT TGCGGCCAAC GCACGTGCCC TGAAGACCTC TTCGGGCTAC GGCTCCAGCG GTACCAACCT GATCCCGAGC CTGATCGCAA TCAACGGCGT GCCGAAGAAC ATGAGTGTCT CCTCCGGCGT CGTCTACAAC GTCTACGGCG GATCGGTCAC TGTCTCGTCC ACCGGCATGG GCTTCTCGAT CACCACCAGC AAGCTGCCCA AGGATGCCTG TATCACCCTG GGCACCAAAA TCGCGAAGAA CACCTTCGAG CAGACCAAGA TCAACAGCGG CACCGCTATC ACTGGTGAGG TCACCACTGC GGCTGCGACC CAGGCCTGCA GCAGCGATAG CAACAGCATT ACCTGGACCT ACAGTTCGTG A
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Protein sequence | MSTTQRTSRP TQGGFVSIEM IIVLIIIAIG VGLGLAAAAG MFSSSNANEE QRNISVIAAN ARALKTSSGY GSSGTNLIPS LIAINGVPKN MSVSSGVVYN VYGGSVTVSS TGMGFSITTS KLPKDACITL GTKIAKNTFE QTKINSGTAI TGEVTTAAAT QACSSDSNSI TWTYSS
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