| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4405 |
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| Symbol | |
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| ID | 5354675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4534994 |
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| End bp | 4537513 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640813453 |
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| Product | usher CupC3 |
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| Protein accession | YP_001349756 |
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| Protein GI | 152987743 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCATTT TCAGGAAAAA GTTCAATTTC AAAATAGCCC TTTGTTCCGG GTCTTCCTGT
TTTATGGCCC TGGGGCTTGC GCTGCCGGCC GCTGTTCAGG CGGTGGAGTT CAATACGGAA
CTCCTGAACA ATACCAATGG CAGTCCGGTT GAACTCAAGT ACTTCGAGCA AGGAAACTCG
GTTGCGCCGG GCTCCTATAA CGTCGACGTC TACCTGAATC AGACGATGAT CCGTCGCCAG
GACATCAACT TCAGCGCCAA TGCCGAAACC GGCGAGGTCC GTCCGGTCAT CCAGGTCGGC
CTGCTCAGGG ACCTGGGTGT CGACGTCGCC CGCCTGATGC GCGACAACCT GATTCCATCC
AATCTCGAGA ACAATACCCC GCTGGACATC GCAGCGCTCA TCCCCGGTGC GTCGGTCGAT
TTCGAAGTCA ACCAGTTGGC CCTGCTGGTC AGCATTCCGC AGATGTACGT CCAGCGGCAT
GTCCGGGGCT ATGTGGATCC TTCCCTGTGG GACGATGGGG TCACGGCGCT GTTCACCAAC
TATCAGGCCA ACTTCAGCCG CAATACCAGC CATGGCGACA GCAGCGACTA TCGATACCTG
GGTTTGCGCA ATGGCTTCAA CCTGTTCGGC TGGCGCCTGC GCAACGACTC CTCCCTGGTC
GGCGGCACCG GAATGCGCAA CAAGTTCAGC AGCAACCGTA CCTATGTAGA GCGCGATATA
CGTCCACTCA AGGGCACCCT TTCTCTCGGT GAGCTGTATA CCAACTCGGA AATCTTCGAC
AGCGTGCGTA TGCGAGGGGT GAGGTTGCAA TCCGATATCG GCATGCAACC CGACAACGAG
GTCGGCTACG CGCCCGTGGT ACGTGGAATC GCTGAAACCA ACGCCACTGT CGAGATACGC
CAGGACGGCT ACGTGATCTA TTCCACCAGC GTATCGCCGG GGGCTTTCGA GATCACCGAC
ATCTATCCCA GCGGTTCCAA CGGTGACTTG GAGGTGAAGA TCATCGAGGA GGATGGGCGC
GAGCGAACCT TCAAGCAGTC GTATTCCTAC CTGCCGGTGA TGACGCGTAA GGGCAATCTG
CGCTACAGCG TATCGGCTGG TGAATACCGG AACGACGGGC AACCTTCGCC CAAGCTGGTG
CAGGGCACCA CTGTCTACGG CGTGTCCGAC AACGTCACCG GGTACGGCGG CCTGCTGGTG
GCCGACAACT ACAATGCCAC CAACCTGGGC CTGGGCTTGA ACACGCCTTA TGGCGGGCTC
TCGATGGACA TCACCCACAG CCAGTCGAAT GCCCGGCGCA GCGGCAGGAA CCAGGGGCAG
AGCTTGCGCT TCCTCTATTC CAAGACCATC AACTCCACCG ACACCAACTT CACCATGGTG
GGCTACCGCT ACTCCACCGA GGGCTACCGG ACGCTCAGCC AGCATGTGGA GGATCTGTCG
AGCGAGGACT TCCTGAATGG TGTCAGCTAT GGCCGGCAGA AGAGCCGCCT GGACCTGACG
GTGAACCAGA CCCTGTTCCG CACCAGTTCG ATCTATCTTA GCGCCGGCGA AACGACGTAC
TGGAACCGCC AGGGCAGCAC CCGCCGCTGG CAGTTCGGCT ACAGCAGCAG CTACAGGAGC
GCCACTTACA GCCTGGCGGT ATCGCGTACC CAGGACACCG GGCCGGTGGG CCAGGCCGAT
ACGCAGTTCA CCGCCTCTGT CAGCATTCCA TTGGGTAGTT CGAGTCGTTC GCACCGTGCC
TACGCCAGTG CCGTATCGTC CCGGCATGGG GATTCCAGCC TGCAGAGCGG CGTATCCGGT
TACCTGGACG ATCAGAACTC CGTCAACTAT TCCGTCCAGG CGGGGCATAG CAAGTACAAC
GGCGACAGCG GTAGCGTGGG GCTTGGCTGG GATACCGCGA AAGCTTCGTT GAGCGCCAAC
TACAGTCAGG GACGCGACAA CAAGCACATC GACATGGGCG CCAGTGGTTC CGTCGTGGTG
CATGGGGGCG GAGTGACCTT TGGCCAGTCG GTCGGGGAAA CCTTCGCGCT GGTCGAGGTG
CCGGATGTCT CCGGTGTCGG TATCGAAGGT TACCGGGGCG TGCGTACCGA TGGCAGCGGC
TATGCGGTAG TGCCCTACGC GCAGCCATAC CGATACAACT ATGTGAACCT GGATGCCACC
ACGCTCGGTT CCGATACCGA GGTTTCCGAC AACTCCAAGA TGGTCGTTCC CACTCGCGGA
GCGGTGGTCC GCAGCAGCTT CGCCGCGGAA TCCGGCCGCC GGGTGCAGTT CGAACTGTCC
ATGGGTTCTG GCGAGAAGAT TCCGTTCGGT GCCCAGGCCT ATGACTCGGA AGAGAAGGTG
GTCGGCATGG TGGACAACCT TTCTCGTCTG CTGGTATTCG GCATCCAGGA TCAGGGACGT
CTTTCCATCC GTTGGAGCAG CGGCTCTTGC ATGGCTGACT ACCAGTTGCC GCCGAAGAAT
AAGGAGCTCG CCTATGAACG CGTGCAGCTC TCTTGCATCG CTTCCAGCAA CAGGACTTGA
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| Protein sequence | MAIFRKKFNF KIALCSGSSC FMALGLALPA AVQAVEFNTE LLNNTNGSPV ELKYFEQGNS
VAPGSYNVDV YLNQTMIRRQ DINFSANAET GEVRPVIQVG LLRDLGVDVA RLMRDNLIPS
NLENNTPLDI AALIPGASVD FEVNQLALLV SIPQMYVQRH VRGYVDPSLW DDGVTALFTN
YQANFSRNTS HGDSSDYRYL GLRNGFNLFG WRLRNDSSLV GGTGMRNKFS SNRTYVERDI
RPLKGTLSLG ELYTNSEIFD SVRMRGVRLQ SDIGMQPDNE VGYAPVVRGI AETNATVEIR
QDGYVIYSTS VSPGAFEITD IYPSGSNGDL EVKIIEEDGR ERTFKQSYSY LPVMTRKGNL
RYSVSAGEYR NDGQPSPKLV QGTTVYGVSD NVTGYGGLLV ADNYNATNLG LGLNTPYGGL
SMDITHSQSN ARRSGRNQGQ SLRFLYSKTI NSTDTNFTMV GYRYSTEGYR TLSQHVEDLS
SEDFLNGVSY GRQKSRLDLT VNQTLFRTSS IYLSAGETTY WNRQGSTRRW QFGYSSSYRS
ATYSLAVSRT QDTGPVGQAD TQFTASVSIP LGSSSRSHRA YASAVSSRHG DSSLQSGVSG
YLDDQNSVNY SVQAGHSKYN GDSGSVGLGW DTAKASLSAN YSQGRDNKHI DMGASGSVVV
HGGGVTFGQS VGETFALVEV PDVSGVGIEG YRGVRTDGSG YAVVPYAQPY RYNYVNLDAT
TLGSDTEVSD NSKMVVPTRG AVVRSSFAAE SGRRVQFELS MGSGEKIPFG AQAYDSEEKV
VGMVDNLSRL LVFGIQDQGR LSIRWSSGSC MADYQLPPKN KELAYERVQL SCIASSNRT
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