Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_4021 |
Symbol | |
ID | 5355954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4161997 |
End bp | 4162521 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640813071 |
Product | RNA polymerase ECF-subfamily sigma-70 factor |
Protein accession | YP_001349375 |
Protein GI | 152984913 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.27293 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGTTCG ATCCCGCCAA GCCGACCTTG CTGTCCACAC TGGTTCGTCA CTACGAGGAA CTGGTCGACC ACATTCGCCG GCGCTTCGGC GACCGGGGCA TGGCGCGCGA GGTAGTGCAC GACGTGTGCG TGCAGTTGCT CGAGCGTGAC GAGAAGGGCG ACGTCCACAC GCCCCTGGCG CTGCTGCGGA AAATCTCCCA CGACACCGCC GTGAGCCGCT ATCGTAGCGA GCGCCGCCGC GCGGCCTGGG TGGAAGCCGT CGCCGAGCTT CCCGAGGTCG CCTGCGCGGC GGCGACCCCG GTGGGCCGGC ATGAGGCCGA GCGCGAGTTC CAGGCGCTGG TCGAGGCCAT CGCCGCGCTT CCTCCTCGCT GCCAGGCCGT TTTCGTCATG CACAAGATCC ACGAGATTCC CCAGGCGCAA GTCGCCGCCC GGCTCGGCAT TTCCATCAAG ACCGTGGAAA AGCACCTGCG TCTTGGATTG ACGGCCTGCC GGGAACGCCT CGGGCGTGGC GAGGTACAGG CATGA
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Protein sequence | MPFDPAKPTL LSTLVRHYEE LVDHIRRRFG DRGMAREVVH DVCVQLLERD EKGDVHTPLA LLRKISHDTA VSRYRSERRR AAWVEAVAEL PEVACAAATP VGRHEAEREF QALVEAIAAL PPRCQAVFVM HKIHEIPQAQ VAARLGISIK TVEKHLRLGL TACRERLGRG EVQA
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