Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3971 |
Symbol | |
ID | 5355370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 4115861 |
End bp | 4116679 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640813021 |
Product | putative transcriptional regulator |
Protein accession | YP_001349325 |
Protein GI | 152985198 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.347316 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTCGCA ACAGTGAGAC GACTCCCGAT CCGGACAAGG TCATCCATAT TCCTTGTGCC GATTCGTTTT CCGTCATCGT TCAGTTGCGC GACTTCAACT CCCACCGTCT CTGGAATGGA AAAAAACTGG TATTCGATGG CGGTCATCCG CAGAAAAGTA TCTCCATCGC CTATCTTGGC GATGAAATAA AGTGCCAGCA CCGGGCAACT TACGACAATG TCCGCTTCAT GTTGCCGCGC GCTTCGATAA AGGAGTTTCT TTACGAAGAG GGGCAGCGCA TGTCCGCCGA ACCGGAGCGG ATCATCGGCG TCGACGACCC GGTGGTCTAT CACCTGGCCC TGGCGCTGCT GCCCAGCTTC GCCAGGGCGG GGGAGCGCAA CGAGCTGTTC ATCGAACAGG TCATGCTGGC GCTATTGACC CACGTCCAGG ATCGCTTCGC CTCGACCCCG GTCCCGGCCT GTACTGGCAA GGGCCTGGCG CCCTGGCAAT TGCGCAGGGC CAAGGAGCTG ATCGCCGGGC ATCTGAGCGA GGGCGTATCG GTGGCGCGCC TGGCCGAGGA GTGCGGCCTC TCGCGCAGCT ATTTCACCAA GGCCTTCAAG TGCAGCACCG GTGTGTCGCC CCACGAATGG CTGATGCGCA TGCGCGTCGA CAGGGCCAAG GAGCTGATGC TGGGCAGCGA CGAACCGCTG TCGCAGATCG GCGTCGCCTG CGGCTTTTCC GACCAGCCGC ATTTCTCGCG GATCTTTCTC CGGCTGGCCG GCGCCTCGCC CTCGACCTGG CGCCGGGTCA AGCGGCAGCG CGCCGACGCA GCGCTCTGA
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Protein sequence | MIRNSETTPD PDKVIHIPCA DSFSVIVQLR DFNSHRLWNG KKLVFDGGHP QKSISIAYLG DEIKCQHRAT YDNVRFMLPR ASIKEFLYEE GQRMSAEPER IIGVDDPVVY HLALALLPSF ARAGERNELF IEQVMLALLT HVQDRFASTP VPACTGKGLA PWQLRRAKEL IAGHLSEGVS VARLAEECGL SRSYFTKAFK CSTGVSPHEW LMRMRVDRAK ELMLGSDEPL SQIGVACGFS DQPHFSRIFL RLAGASPSTW RRVKRQRADA AL
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