Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3844 |
Symbol | cycH |
ID | 5355403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3980200 |
End bp | 3981420 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640812894 |
Product | cytochrome c-type biogenesis protein |
Protein accession | YP_001349198 |
Protein GI | 152983773 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATT TCTGGCTCGC CGCCGGCCTG CTGCTGCTGG CGGCCCTGGC ATTCCTGCTG ATTCCGCTGC TGCGTGGCCG TCGCGCCCAG GCCGAGGAAG ACCGTACCGC CCTCAACGTC GCGCTCTACC AGGAGCGGAT CGCCGAGTTG GCCGGCCAGC AGGCCGCCGG CACGCTGACC GCCGAGCAGC TGGAGAGCGG CCGCGCCGAG GCCGCCCGCG AACTGCTCGC CGATACCGAA GGCAGCGGCG AGGAGCGCAA CTCGCGCCTG GGCCGGGCGC TGCCAATGGT CGCGGCGCTG CTGGTGCCGC TGGTCGCGCT CGGCCTCTAC CTGCACTGGG GGGCCAGCGA CAAGGTCGAG CTGGCCCGCG AGTTCGCCCA GGCCCCGCAT TCGATGGAAG AGATGACCAG GCGCCTGGAG CGCGCAGTCG AGGCCCAGCC GGACTCTGCC CAGGGCTGGT ACTTCCTCGG TCGCACCTAC ATGACCCAGG AGCGCGGCGC CGACGCGGCG CGTGCCTTCG AGCGTGCCGC CGAACTCAGT GGACGGCAGC CGGAAGTGCT CGGCCAGTGG GCGCAGGCGC TGTATTTCTC CGGCGGCAAG AAAATGACCG CGCAGATCAA GGCCCTGGCC GACGAGGCGC TGAAGGGCGA CCCGGCCGAA GTGACCACCC TCGGCCTGCT CGGCATCGCC GCCTTCGAAG AGCAGCGCTA CGCCGACGCC ATCGGTTTCT GGGAGCGCCT GGTGTCGGTG TTGCCGAACG AGGACCCGGC GCGCTCGGCG ATCCAGGGCG GCATCCAGCG TGCCCGCGAG CGCATGACCG AGGCCGGGCA GACCCCGCCG GCGCCGGCCG CGCCCGCCGC CCAGGTGATC CTGACGGTGA AGGTGGATAT CAGCGACGCG GTGAAGGGCC AGGTCAAGGC CGACGACAGC GTGTTCGTTT TCGCCCGTGC CGTCGGCGGC CCGCCGATGC CGTTGGCGGT GAAGCGCCTG ACCGTCGCCG ACCTGCCGGC CGAGGTCAGC CTGAGCGATG CCGACGCCAT GATGCCGCAG CTCAAGCTCA GTGGTTTCCC GCAAGTCGAG CTGGTGGCGC GGGTATCCCG CGCCGGCAAC GCCGTCTCCG GCGAGTGGAT CGGACGCGGC AAACCGTTGT CTACTGCGCA GTCGTCGGCG CAAGCGCTGA CCATCGACGG CCCGGACCAG CCTCAGGCGG CCCGGCCATA A
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Protein sequence | MIDFWLAAGL LLLAALAFLL IPLLRGRRAQ AEEDRTALNV ALYQERIAEL AGQQAAGTLT AEQLESGRAE AARELLADTE GSGEERNSRL GRALPMVAAL LVPLVALGLY LHWGASDKVE LAREFAQAPH SMEEMTRRLE RAVEAQPDSA QGWYFLGRTY MTQERGADAA RAFERAAELS GRQPEVLGQW AQALYFSGGK KMTAQIKALA DEALKGDPAE VTTLGLLGIA AFEEQRYADA IGFWERLVSV LPNEDPARSA IQGGIQRARE RMTEAGQTPP APAAPAAQVI LTVKVDISDA VKGQVKADDS VFVFARAVGG PPMPLAVKRL TVADLPAEVS LSDADAMMPQ LKLSGFPQVE LVARVSRAGN AVSGEWIGRG KPLSTAQSSA QALTIDGPDQ PQAARP
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