Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3806 |
Symbol | smc |
ID | 5354336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3938982 |
End bp | 3942470 |
Gene Length | 3489 bp |
Protein Length | 1162 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640812856 |
Product | chromosome segregation protein SMC |
Protein accession | YP_001349160 |
Protein GI | 152985977 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGA AGAGCATCAA GCTGGCGGGG TTCAAGTCCT TCGTCGATCC GACCACGGTG AACTTCCCCA GCAACATGGC GGCAGTGGTC GGACCGAACG GCTGCGGCAA GTCGAACATC ATCGACGCGG TGCGCTGGGT GATGGGCGAG AGTTCAGCGA AGAACCTGCG CGGCGAGTCG ATGACCGACG TCATCTTCAA TGGCTCGAAC ACCCGCAAAC CGGTGAGCCA GGCGAGCATC GAGCTGATCT TCGACAACGC CGAGACCACG CTCGTCGGCG AATACGCCCG GTACGCCGAG ATATCCATTC GCCGACGGGT CTCGCGGGAC GGGCAGAACA CCTATTTCCT CAACGGCACC AAGTGCCGGC GGCGCGATAT CACCGACATC TTCCTCGGCA CCGGCCTGGG GCCGCGCAGC TACTCGATCA TCGAACAGGG CATGATCTCC AAGCTGATCG AGGCGCGTCC GGAAGACCTG CGCAACTTCA TCGAGGAAGC CGCGGGCATT TCCAAATACA AGGAGCGCCG CCGCGAAACC GAAAGCCGCA TCCGTCGGAC CCAGGAAAAC CTGGCACGCC TCACCGACCT GCGCGAAGAG CTGGGGCGGC AACTGGAGCG CCTGCACCGC CAGGCCCAGT CGGCGGAAAA ATACCAGGAA CACAAGGCCG AGGAGCGCCA GCTCAAGGCC CAGCTGGGCG CCGTGCGCTG GCGCGACCTG AACGAGCAGG TCGGTCAGCG CGAGCGGGTG ATCGGCGACC AGGAGATCGC CTTCGAGGCC CTGGTGGCCG AGCAGCGTGG CGCCGATGCC GGCATCGAAC GGCTGCGCGA CGGCCATCAC GAGTTGTCCG AACGCTTCAA CCAGGTGCAG GCGCGTTTCT ATTCGGTCGG CGGCGACATC GCCCGGGTCG AGCAGAGCAT CCAGCATGGC CAGCAGCGCC AGCGTCAGTT GCAGGACGAC CTGCGCGAAG CCGAACGGAC CCGCCAGGAA ACCGAATCGC ACCTCGGGCA CGACCGTACC CTGCTGGCGA CCCTGGCAGA GGAAATGGCC ATGCTCGCGC CGGAGCAGGA GCTCAGCGCG GCCGCCGCGG AAGAGGCGGG CATCGCCCTG GAACAGGCCG AGCAGGACAT GCAGGCCTGG CAGCAGCAGT GGGATGCCTT CAACCAGCAG AGCGCCGAGC CCCGCCGCCA GGCCGAGGTG CAGCAGTCGC GCATCCAGCA TCTGGAACAG AGCCTGGAGC GCCTGCAGGA CCGCGAGCGA CGCCTGCAGG ACGAGCGTGG CCAGTTGGCG GCCGATCCCG AGGACGCGGC GATCCTCGAG CTCAACGAAC AGGTGGCGAT CGCCGAGCTG GCCCTGGAAG AACTGCAATT GCAGGAGCAG GGCCAGGCCG AGCGGCTCGA ACAATTGCGC CGGGAATTGC AGCAACTGGC GGCCGAACAG AACCTGGCGC AGGGCGAGTT GCAGCGCCTG AACGGGCGTA TCGCTTCGCT GGAGGCCTTG CAGCAGGCGG CTCTCGATCC CGGACAGGGC GCGTTGGAGT GGTTGCGCGA ACAGGGCCTG GAACAACGTC CGCGCCTCGC CGAAGGCCTG CGCGTCGAGC CGGGCTGGGA GCTGGCGGTG GAGACCGTGC TCGGCGCGGA TCTGCAGGCG GTCTTGCTGG ACGGCTTCGA CGGGCTCGAC CTGGGCGGCT TCGGCAAGGG CGAACTGCGC CTGCTCAGCC CCGCTCGCGG AGCCGCGAAG GCGTCCGGTT CGCTGCTGGA CAAGGTTCGT GCCGACGCCG ACCTGAGTCC CTGGCTGGCC CGGGTGACGC CGGTGGAGAC CCTGGAGCAG GCGCTCGCCC AGCGCGGCGC CCTGGACGAC GGCGAGAGCC TGATCAGTCG CGATGGCTAT TGGGTCGGCC GGCACTTCCT GCGGGTCCGG CGCAGCGACG AGGCCCAGGG CGGCATGCTC GCCCGCGCCC AGGAACTGGA GGCGTTGCAG GAACAGCGCG AGACCCTGGA AACCCGTGTC GCCGAAGGCG AGGAGCGCCT GGCCGCGGCC CGCGACGAGC AGCGCGAGCT GGAAGGCGCG CGCGAGCAGG TGCGCCGGCA GGTCCAGGAG GAGGGTCGCC GGCACGGCGA GCTGAAGGCG CAGTTGTCCG CGCAGCAGGC CAAGGTCGAG CAACTGGTGC TGCGTCGCCG CCGTCTCGAC GAAGAAGTGG CGGAACTGGC CGAGCAGCGC GCGCTGGAAC AGGAACAACT GAGCGAGGCG CGCCTGACCC TGCAGGAAGC ACTGGATAGC ATGGCGCTGG ACACCGAGCG GCGGGAAACC CTGCTGGCCG AGCGTGACGC CCTGCGCGAA CGGCTCGACC GGATTCGCCA GGATGCCCGT ACCCACAAGG ACCATGCGCA TCAACTGGCG GTGCGGGTCG GCTCGCTCAA GGCGCAGCAC AATTCCACCC AGCAGGCCCT GGAGCGCCTC GACCAGCAGT CGGCTCGCCT CAACGAGCGT TGCGAGCAGC TCAACCTCAA CCTGGAGGAG GGCGCCGCGC CGCTGGAAGA GCTGCGCATG AAGCTCGAGG AGTTGCTGGA GCGACGGATG GCCGTCGAGG ACGAGCTGAA GCAGGCGCGG CTGGCCCTGG AAGACGCAGA CCGCGACTTG CGCGATGTGG AGAAGCGCCG CAGCCAGGCC GAGCAGCAGT CGCAGCTGCT GCGCGGGCAG CTGGAGCAGC AGCGCCTGGA ATGGCAGGGG CTGGTGGTGC GGCGCAAGGC CCTGCAGGAG CAGCTCGCCG AGGACGGCTA CGAATTGCAC ACGGTGCTGG CCAACCTGCC GCTGGATGCC AGCGAGCGCG AATGGGAGGA GCGTCTGGAA AGTCTCGCGG CGCGTATCCA GCGGCTCGGC CCGATCAACC TGGCGGCGAT CGAGGAGTAC CAGCAGCAGT CCGAGCGCAA GCGCTACCTG GACTCGCAGA ACGACGACCT GGCCGAGGCG CTGGAAACCC TGGAGAACGT CATCCGCAAG ATCGACCGGG AAACCCGCAA TCGTTTCAAG GAAACCTTCG ACCAGATCAA TGGTGGCCTT CAGGCATTGT TCCCGAAGGT CTTCGGCGGC GGCACGGCCT ATCTGGAACT TACCGGCGAA GATCTACTCG ATACCGGGGT GGCGATCATG GCTCGTCCGC CGGGCAAGAA GAACAGCACC ATCCACTTGT TGTCCGGCGG GGAAAAGGCA TTGACCGCAC TGGCGCTGGT ATTCGCCATC TTCCAGTTGA ATCCGGCGCC GTTCTGCATG CTCGACGAAG TCGATGCGCC ATTGGATGAC GCCAACGTCG GACGTTATGC GCGATTGGTG AAGGAAATGT CGGAGAAAGT GCAGTTCATC TATATCACCC ACAACAAGAT CGCCATGGAG ATGGCCGATC AGTTGATGGG CGTGACCATG CATGAGCCGG GCTGTTCACG GCTTGTTGCA GTTGATGTGG AAGAGGCCGT CGCATTGGCT GAAGCCTGA
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Protein sequence | MRLKSIKLAG FKSFVDPTTV NFPSNMAAVV GPNGCGKSNI IDAVRWVMGE SSAKNLRGES MTDVIFNGSN TRKPVSQASI ELIFDNAETT LVGEYARYAE ISIRRRVSRD GQNTYFLNGT KCRRRDITDI FLGTGLGPRS YSIIEQGMIS KLIEARPEDL RNFIEEAAGI SKYKERRRET ESRIRRTQEN LARLTDLREE LGRQLERLHR QAQSAEKYQE HKAEERQLKA QLGAVRWRDL NEQVGQRERV IGDQEIAFEA LVAEQRGADA GIERLRDGHH ELSERFNQVQ ARFYSVGGDI ARVEQSIQHG QQRQRQLQDD LREAERTRQE TESHLGHDRT LLATLAEEMA MLAPEQELSA AAAEEAGIAL EQAEQDMQAW QQQWDAFNQQ SAEPRRQAEV QQSRIQHLEQ SLERLQDRER RLQDERGQLA ADPEDAAILE LNEQVAIAEL ALEELQLQEQ GQAERLEQLR RELQQLAAEQ NLAQGELQRL NGRIASLEAL QQAALDPGQG ALEWLREQGL EQRPRLAEGL RVEPGWELAV ETVLGADLQA VLLDGFDGLD LGGFGKGELR LLSPARGAAK ASGSLLDKVR ADADLSPWLA RVTPVETLEQ ALAQRGALDD GESLISRDGY WVGRHFLRVR RSDEAQGGML ARAQELEALQ EQRETLETRV AEGEERLAAA RDEQRELEGA REQVRRQVQE EGRRHGELKA QLSAQQAKVE QLVLRRRRLD EEVAELAEQR ALEQEQLSEA RLTLQEALDS MALDTERRET LLAERDALRE RLDRIRQDAR THKDHAHQLA VRVGSLKAQH NSTQQALERL DQQSARLNER CEQLNLNLEE GAAPLEELRM KLEELLERRM AVEDELKQAR LALEDADRDL RDVEKRRSQA EQQSQLLRGQ LEQQRLEWQG LVVRRKALQE QLAEDGYELH TVLANLPLDA SEREWEERLE SLAARIQRLG PINLAAIEEY QQQSERKRYL DSQNDDLAEA LETLENVIRK IDRETRNRFK ETFDQINGGL QALFPKVFGG GTAYLELTGE DLLDTGVAIM ARPPGKKNST IHLLSGGEKA LTALALVFAI FQLNPAPFCM LDEVDAPLDD ANVGRYARLV KEMSEKVQFI YITHNKIAME MADQLMGVTM HEPGCSRLVA VDVEEAVALA EA
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