| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3790 |
|---|
| Symbol | |
|---|
| ID | 5359639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3923664 |
|---|
| End bp | 3924500 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640812840 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001349144 |
|---|
| Protein GI | 152987297 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3687] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.422247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCCA GCAGCACCAC CTCTACGGTT CGCGCCAATT TTCCCGTGCG ACGGATGGAT
TTCAGCTTCA GCGAAACCCC GAAGTACTGG TGGGACGGGC AGCCGTTCAT GACCCAGTTC
ATGAACAACC TGTCCTCGCT GTTCCCCTAC GGCGAAAAGT TCTTCGTCGA TAGCGTGCGC
GCCGTGCGCG ACCGCCTGGA GGACCCGCAA CTGAAGAAGG ACGTCAGCGC CTTCATCGGC
CAGGAAGCCA TGCATTCCAA GGAACATGCC GCCTACAACG AATACGCCGA GGAACACGGG
GTCGACCTGG AGTGCCTCGA ACTGCGGATC AAGGTGCTGC TGGAAAACGT CAGCAAGGTC
ACCACGAAGA AACACCAGTT GGCGATCACC TGCGCCCTGG AACATTTCAC CGCGACCATG
GCCGCGCAAT TGCTCAAGCG CGAGGACCTG ACCGTGCAGA TGCAGTCGCC GAAGATGTAC
AAGCTGTGGA TGTGGCACGC CATCGAGGAG AACGAGCACA AGAACGTCGC GTACGACGTC
TACCAGACGG TCTACGGCGG CTACTTCACC CGCATCCTGG TGATGATGCT GACCACCCTG
ATGTTCTTCG GTGTCATCGG CTGGTTCCAG CTCGACCTGC TGCGCAAGGA TCGCCAGTTG
TCCAACTGGC GCTCCTGGAA GCACGGCCTG GGCACTCTCT TCGGCCTGCG CAGGGGCTTC
TTCACGCAAT TGCTGTTGCC CTATCTGGAC TACTACCGCC CGGGCTTCCA CCCGAGCGAC
CACGATACCG CCAGGCTGGA AAAATACTGG AAGGACAAGC TGGCCTTCGC CGATTGA
|
|---|
| Protein sequence | MTASSTTSTV RANFPVRRMD FSFSETPKYW WDGQPFMTQF MNNLSSLFPY GEKFFVDSVR
AVRDRLEDPQ LKKDVSAFIG QEAMHSKEHA AYNEYAEEHG VDLECLELRI KVLLENVSKV
TTKKHQLAIT CALEHFTATM AAQLLKREDL TVQMQSPKMY KLWMWHAIEE NEHKNVAYDV
YQTVYGGYFT RILVMMLTTL MFFGVIGWFQ LDLLRKDRQL SNWRSWKHGL GTLFGLRRGF
FTQLLLPYLD YYRPGFHPSD HDTARLEKYW KDKLAFAD
|
|---|
| |