Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3780 |
Symbol | ccoP1 |
ID | 5359324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3913352 |
End bp | 3914308 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640812830 |
Product | cbb3-type cytochrome c oxidase subunit III |
Protein accession | YP_001349134 |
Protein GI | 152988884 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCT TCTGGAGTCT GTACATTACA GCTCTCACCC TCGGCACCCT GCTGGCGCTG ACCTGGCTGA TCTTCGCCAC CCGCAAGGGC CAGCGCAGCA GCACCACCGA CGAGACCGTG GGCCACTCCT ACGACGGCAT CGAGGAGTAC GACAACCCGC TGCCGAAGTG GTGGTTCATG CTGTTCGTCG GCACCCTGGT GTTCGCCGTG GGCTACCTGG CCCTGTACCC GGGCCTGGGC ACCTGGAAAG GCCTGATGCC GGGCTACCAG TCCGCCGACG AGTTCGCCGA CAAGGAAAAA GGCTGGACCG GCGTCCACCA GTGGGAAAAG GAAATGGCCA AGGCCGACGA GAAGTACGGC CCGATCTTCG CCAAGTTCGC CGCGATGCCC ATCGAGGAAG TCGCCAAGGA TCCGCAGGCG GTGAAAATGG GCGGTCGCCT GTTCGCCTCC AACTGCTCGA TCTGCCATGG CTCCGACGCC AAGGGCGCCT ACGGCTTCCC CAACCTGACC GACGCCGACT GGCGCTGGGG CGGCGAGCCG GAAACCATCA AGACCACCAT CATGGCTGGC CGCCACGCCG CCATGCCGGC CTGGGGTGAA GTGATCGGCG AGGAAGGCGT GAAGAACGTC GCCGCTTTCG TCCTCACCCA GATGGATGGC CGTAAGCTGC CGGAAGGCGC CAAGGCGGAC ATCGAGGCCG GCAAGCAGGT CTTCGCTACC ACCTGCGTCG CCTGCCACGG TCCGGAAGGC AAGGGCACCC CGGCGATGGG CGCTCCCGAT CTGACCCACC CCGGCGCGTT CATCTACGGC TCCAGCTTCG CGCAACTGCA GCAGACCATC CGCTACGGTC GCCAGGGTGT GATGCCGGCG CAACAGGAAC ACCTGGGCAA CGACAAGGTG CACCTGCTGG CCGCCTACGT ATACAGCCTG TCGCACGGCG AGAAGAGCGC CGAATAA
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Protein sequence | MTTFWSLYIT ALTLGTLLAL TWLIFATRKG QRSSTTDETV GHSYDGIEEY DNPLPKWWFM LFVGTLVFAV GYLALYPGLG TWKGLMPGYQ SADEFADKEK GWTGVHQWEK EMAKADEKYG PIFAKFAAMP IEEVAKDPQA VKMGGRLFAS NCSICHGSDA KGAYGFPNLT DADWRWGGEP ETIKTTIMAG RHAAMPAWGE VIGEEGVKNV AAFVLTQMDG RKLPEGAKAD IEAGKQVFAT TCVACHGPEG KGTPAMGAPD LTHPGAFIYG SSFAQLQQTI RYGRQGVMPA QQEHLGNDKV HLLAAYVYSL SHGEKSAE
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