| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3727 |
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| Symbol | |
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| ID | 5358644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3864574 |
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| End bp | 3865185 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640812777 |
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| Product | conjugal transfer protein |
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| Protein accession | YP_001349081 |
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| Protein GI | 152985449 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCC CAACCACCAC CGCCAACGCG CCTGCCGTTG CGCCACGTCC TCGCTCGCAC
CCGCGTTCAC GTTTGCGCGC TCGCATCGTC GTGGCGACAC TGGCCGCCAT CGGCTTCGCT
GCGCTGGCCT GGGCGGCTTT CGTGTCGCCG CTGCCGCGTC TGACCTACAA CCCGTCCGAC
AGCGTGGCGG TCGGCTGGTA TCGCATCGAC CCGTTCAACC CGCGCACCGC CTCGCTGCCA
CGTCCGTTGT CCGTGGACAG CATCGTGCTG GTGCCGCTTC CGGCCACGGC CGCCGGGCTC
GCTGCGCAGC GCGGCTACCT GCCGACGCGC GTTCCGCTGC TCAAACGTGT GGGCGCGGTC
GCGCCGCAAC ACGTCTGCAT CGTCGCCGGT CAGGTACGCA TCGACGGCGT GCCTTCGGCC
ACCGTGCTGC CTGCCGACCG GCTGGGCCGG GAGCTGCCAT CCTTACAGCT TTGCCGCCGC
CTTGAACCGG GCGAACTGTT CCTGTTGAGC GTGACGAATC CGGCATCGTT CGACAGCCGC
TATTTCGGCC CGGTGAGCAC ATCCGCCGTG ATCGGCGTTG CGCATCCGGT GTGGCTGGTG
ACACGCCCAT GA
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| Protein sequence | MTAPTTTANA PAVAPRPRSH PRSRLRARIV VATLAAIGFA ALAWAAFVSP LPRLTYNPSD
SVAVGWYRID PFNPRTASLP RPLSVDSIVL VPLPATAAGL AAQRGYLPTR VPLLKRVGAV
APQHVCIVAG QVRIDGVPSA TVLPADRLGR ELPSLQLCRR LEPGELFLLS VTNPASFDSR
YFGPVSTSAV IGVAHPVWLV TRP
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