| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3691 |
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| Symbol | sdhA |
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| ID | 5357951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3825342 |
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| End bp | 3827114 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640812741 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_001349045 |
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| Protein GI | 152984534 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGCA TTCGTACACT TTCCTTTGAC GCCATCATCG TCGGTGGCGG TGGCGCCGGC
ATGCGCGCCG CGCTGCAACT GGCCCAGGGT GGCCACAAGA CCGCCGTGGT GACCAAGGTC
TTCCCGACCC GTTCCCACAC CGTATCCGCA CAGGGCGGCA TCACCTGCGC CATCGCCTCG
GCCGACCCGA ACGACGATTG GCGCTGGCAC ATGTACGACA CCGTCAAGGG CTCCGACTAC
ATCGGTGACC AGGACGCGAT CGAATACATG TGCTCCGTCG GCCCCGAGGC CGTGTTCGAA
CTCGAGCACA TGGGCCTGCC GTTCTCCCGT ACCGAAACCG GCCGCATCTA CCAGCGTCCG
TTCGGCGGCC AATCCAAGGA CTTCGGCAAG GGTGGCCAGG CCGCCCGTAC CTGCGCCGCC
GCCGACCGTA CCGGTCACGC GCTGCTGCAC ACCCTGTACC AGGCCAACCT GAAGAACGGC
ACCTCGTTCC TCAACGAGTG GTACGCGGTC GACCTGGTGA AGAACCAGGA CGGCGCGGTG
GTCGGCATCA TCGCCATCTG CATCGAGACC GGCGAGACCG TCTACATCCG TTCCAAGGCC
GTGGTCCTGG CCACCGGCGG CGCCGGCCGC ATCTACGCCT CTACCACCAA CGCCCTGATC
AACACCGGTG ACGGCGTGGG CATGGCCCTG CGCGCCGGTG TGCCGGTGCA GGACATCGAG
ATGTGGCAGT TCCACCCGAC CGGCATCGCC GGCGCCGGTG TGCTGGTCAC CGAGGGCTGC
CGCGGCGAGG GTGGCTACCT GATCAACGCC CATGGCGAGC GCTTCATGGA GCGCTACGCG
CCGAACGCGA AGGACCTGGC CGGTCGCGAC GTGGTCGCCC GCTCCATGGT CAAGGAAGTC
CTGGCCGGCA ACGGCGTGGG CCCGAACAAG GACCACGTGC TGCTGAAGCT CGACCACCTC
GGCGAGGAAG TCCTGCACAG CCGCCTGCCC GGCATCTGCG AACTGTCCAA GACCTTCGCC
CACGTCGACC CGGTCGTCGC GCCGATCCCG GTGATCCCGA CCTGCCACTA CATGATGGGC
GGCGTTGCCA CCAACATCCA TGGCCAGGCC ATCACCCAGG ACGCCAACGG CAACGACCAG
ATCGTCGAAG GCCTGTTCGC CGTGGGCGAA GTGGCCTGCG TATCGGTGCA CGGCGCCAAC
CGCCTGGGCG GCAACTCGCT GCTCGACCTG GTGGTGTTCG GCCGTGCCGC CGGTCTGCAC
CTGGAGAAAG CGCTGAAAGA GGGCATCGAC GCCCGTGGCG CCTCCGAGAG CGACCTGGAG
GCCTCCTTCA AGCGCCTGAA CGGCGTGAAC GAGCGCACCA GCGGCGAAGA AGTCGCTCCG
CTCAAGCGCG AGCTGCAAAG CTGCATGCAG AACTACTTCG GTGTGTTCCG CACCGGCGAG
TACATGCAGA AGGGCATTGC CCAGCTGGCC GACCTGCGCG AGCGTATCGC CAACGTCAAG
ATCAACGACA AGAGCCAGGC ATTCAACACC GCGCGCATCG AAGCGCTGGA ACTGCAAAAC
CTCCTCGAGG TGGCCGAGGC CACCGCGATC GCGGCCGAGC ACCGCAAGGA GTCCCGTGGC
GCCCACGCCC GTGAAGACTT CGAGGAGCGC GACGACGAGA ACTGGCTGTG CCACACCCTG
TACTTCCCGG GTGAGAAGCG CGTATCCAAG CGTTCCGTCA ACTTCGCGCC GAAGACCGTT
CCGGCATTCG AACCCAAGGT TCGGACTTAC TAA
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| Protein sequence | MASIRTLSFD AIIVGGGGAG MRAALQLAQG GHKTAVVTKV FPTRSHTVSA QGGITCAIAS
ADPNDDWRWH MYDTVKGSDY IGDQDAIEYM CSVGPEAVFE LEHMGLPFSR TETGRIYQRP
FGGQSKDFGK GGQAARTCAA ADRTGHALLH TLYQANLKNG TSFLNEWYAV DLVKNQDGAV
VGIIAICIET GETVYIRSKA VVLATGGAGR IYASTTNALI NTGDGVGMAL RAGVPVQDIE
MWQFHPTGIA GAGVLVTEGC RGEGGYLINA HGERFMERYA PNAKDLAGRD VVARSMVKEV
LAGNGVGPNK DHVLLKLDHL GEEVLHSRLP GICELSKTFA HVDPVVAPIP VIPTCHYMMG
GVATNIHGQA ITQDANGNDQ IVEGLFAVGE VACVSVHGAN RLGGNSLLDL VVFGRAAGLH
LEKALKEGID ARGASESDLE ASFKRLNGVN ERTSGEEVAP LKRELQSCMQ NYFGVFRTGE
YMQKGIAQLA DLRERIANVK INDKSQAFNT ARIEALELQN LLEVAEATAI AAEHRKESRG
AHAREDFEER DDENWLCHTL YFPGEKRVSK RSVNFAPKTV PAFEPKVRTY
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