| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3688 |
|---|
| Symbol | sucB |
|---|
| ID | 5357549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3820260 |
|---|
| End bp | 3821492 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640812738 |
|---|
| Product | dihydrolipoamide succinyltransferase |
|---|
| Protein accession | YP_001349042 |
|---|
| Protein GI | 152983895 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.74746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATCG AAATCAAAGC CCCAACCTTC CCGGAATCGG TCGCCGACGG CACCGTCGCC
ACCTGGCACA AGAAGCCGGG CGAAGCGGTC AAGCGTGACG AACTGATCGT CGACATCGAG
ACCGACAAGG TCGTCATCGA GGTTCTCGCC GAGGCTGATG GCGTGCTGGC CGAGATCATC
AAGAACGAAG GCGACACCGT TCTGAGCAAC GAGCTGCTCG GCAAGCTGAA CGAAGGCGGT
GCCGCCGCTC CGGCCGCTCC GGCTGCCGCT GCGCCCGCCG CCGCTCCGGT TGCCCAGGCC
GCTGCCGCTC CGGCTGCCGC TGGCGGCGAC GATGCCATCC TGTCCCCGGC CGCGCGCAAG
CTGGCCGAGG AAGCCGGCAT CGACCCGAAC AGCATCGCCG GCACCGGCAA GGGCGGTCGC
GTGACCAAGG AAGACGTGGT CGCCGCCGTC GAAGCGAAGA AGAACGCCCC GGCCGCTCCG
GCCAAGCCTG CCGCTCCGGC CGCCGAGGCG CCGATCTTCG CCGCTGGCGA TCGTGTCGAG
AAGCGCGTGC CGATGACCCG CCTGCGCGCC AAGGTCGCCG AGCGCCTGGT CGAGGCGCAG
TCCGCCATGG CCATGCTGAC CACCTTCAAC GAGGTCAACA TGAAGCCGAT CATGGACCTG
CGTTCGAAGT ACAAGGACCT CTTCGAGAAG AAGCACAACG GTGTTCGCCT GGGCTTCATG
TCCTTCTTCG TCAAGGCCGC CACCGAGGCG CTGAAGCGCT TCCCGGGGGT CAACGCCTCC
ATCGACGGCA ACGACATCGT CTACCACGGC TACCAGGACA TCGGCGTTGC CGTTTCCAGT
GATCGTGGCC TGGTGGTCCC GGTCCTGCGT AACGCCGAGT TCATGAGCCT GGCCGAAATC
GAAGGCGGCA TCGCCAACTT CGGCAAGAAG GCGAAGGAAG GCAAGCTGAC CATCGAGGAC
ATGACCGGCG GTACCTTCAC CATCTCCAAT GGTGGCGTGT TCGGTTCCCT GCTCTCGACC
CCGATCGTCA ACCCGCCGCA GACCGCCATC CTCGGCATGC ACAAGATCCA GGAGCGCCCG
ATGGCCGTGA ACGGCCAGGT GGTGATCCTG CCGATGATGT ACCTGGCGCT GTCCTACGAC
CACCGTCTGA TCGACGGCAA GGAAGCGGTG AGCTTCCTGG TGGCCATCAA GGACCTGCTG
GAAGATCCGG CTCGCCTGCT GCTGGACGTC TGA
|
|---|
| Protein sequence | MAIEIKAPTF PESVADGTVA TWHKKPGEAV KRDELIVDIE TDKVVIEVLA EADGVLAEII
KNEGDTVLSN ELLGKLNEGG AAAPAAPAAA APAAAPVAQA AAAPAAAGGD DAILSPAARK
LAEEAGIDPN SIAGTGKGGR VTKEDVVAAV EAKKNAPAAP AKPAAPAAEA PIFAAGDRVE
KRVPMTRLRA KVAERLVEAQ SAMAMLTTFN EVNMKPIMDL RSKYKDLFEK KHNGVRLGFM
SFFVKAATEA LKRFPGVNAS IDGNDIVYHG YQDIGVAVSS DRGLVVPVLR NAEFMSLAEI
EGGIANFGKK AKEGKLTIED MTGGTFTISN GGVFGSLLST PIVNPPQTAI LGMHKIQERP
MAVNGQVVIL PMMYLALSYD HRLIDGKEAV SFLVAIKDLL EDPARLLLDV
|
|---|
| |