Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3654 |
Symbol | |
ID | 5354795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3784834 |
End bp | 3785658 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640812704 |
Product | putative transcriptional regulator |
Protein accession | YP_001349008 |
Protein GI | 152983765 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.232111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAGA TCACCCATCT CAGCAGCGGG ATTCCCGGCG TACGCCTGAT CGACGCCGTG CACAACCGCT TTTCCTTTCC CCGGCACTTC CACCTGGAGT ACCACATCGG CTTGCTGCTG CAGGGCCGGC ATCGCTATGT CGCCGGCGGC GAACGGCGCC TGGCCGGGGC CGGCGATGCC TTGCTGATGG CGCCGGAAAG CATCCACGAC GGCAGCAGCG CCGGCGAGGA AGGCTATCGG ATTCGCGTCC TGGCGCTCGA TGCCGACTGG CTGGAGCGCG CCGGCCGCGA CTTCAGCGAC GGCCGCCGCG GCGCGCCGCG CCTGACCGGC AGCCTGGTTC GCGACGAGCG CCTGCAGCAG CGCCTGCGCC AGCTGCACCT GGGCATGCTC GGCGGAGCGG CGGCGCTGGA GAACCGCCTG GCCCTGGAAG AACATCTCTG GCAGGCGCTG GCCTGCCTGC TCAGCCTGGG CAGCAGCCTG CGCGTGGAGG AGGACGACCG GGAAGGATTC GGCCGGCGCG ATTGGAGGCG GCTGCGCGAA TGGCTCGAGT CGCGCCTGGA ATACCCGCCG AGCCTGGAGG AGTTGGCCGC TTTCTGCGGA TTGAGTCCGT GGCAGGCGCT GCGGCGTTTC CGCCGACATT GTGGCCTGCC GCCCCACCAG TGGCTGACCC AGTTGCGCCT GGAGCGCGCC TTGCCGCTGG TGCTGCGCGG CGAGCAGCCG CTGAGCCAGG TGGCCCAGCA GTTCGGTTTC TACGACCAGG CGCACTTCAG TCGTCTGTTC CGCCGTACCT ACGGTTTGCC GCCAGCCCGT CTGCGCCAGC GCTGA
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Protein sequence | MEQITHLSSG IPGVRLIDAV HNRFSFPRHF HLEYHIGLLL QGRHRYVAGG ERRLAGAGDA LLMAPESIHD GSSAGEEGYR IRVLALDADW LERAGRDFSD GRRGAPRLTG SLVRDERLQQ RLRQLHLGML GGAAALENRL ALEEHLWQAL ACLLSLGSSL RVEEDDREGF GRRDWRRLRE WLESRLEYPP SLEELAAFCG LSPWQALRRF RRHCGLPPHQ WLTQLRLERA LPLVLRGEQP LSQVAQQFGF YDQAHFSRLF RRTYGLPPAR LRQR
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