Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3611 |
Symbol | |
ID | 5353538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3739524 |
End bp | 3740531 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640812661 |
Product | hypothetical protein |
Protein accession | YP_001348965 |
Protein GI | 152984934 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.246308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACCG CGCATGGGTT TGCAGCCCCT GCTGTAAGCG CGTTGGCACG GGGTATTCGC GAATACTCGC TGTTCCAGGC GGTCCTGCTG GTCATGGATC GTCTGCGCGA GCAATACCCC GGGCTGGGGG ACGAGGCGCT TTACGATCAG CTGGAATTCC AGGCCAATCC TAGTCTCGGC TTTCCGGCCA GCGATATAGA TCGGGTGGAG TTCTTCGAAG AGCGCGGCAT GCTGCGGGCG CGGCTGCGCT TCAACCTGAT GGGGTTGTTC GGTTCCAGTT CGCCGCTGCC GGCGTTCTAC AGCGAGCAGG CCCTGGGCGA CAGTGAGGAG AGTAACCCTA CGCGGAACTT CCTCGATCTT TTCCATCACC GCCTGCATCG GTTGCTGTTG CCCATCTGGC GCAAGTATCG CTACCGGGTG AGTTTCCAGA GCGGCGCGAG CGATGCGTTC TCCGCCCAAT TGTTCTCCGT TGTCGGGCTG GGTGGAGAAG AGATCCGCAA GGCCAGGGAG CTGAACTGGA AACGTCTGCT GCCCTACCTC GGTCTGCTCA GCCTGCGGGC CCACTCGGCG GCCCTGATCG AGTCGGTGCT GCGCTACTAC TTCAAGCACG CCGAGCTGCT CGCCGAGCAA TGCATCGAAC GGCGCGTCGC GATCCTCGAG GAGCAGCGCA ACCGGCTCGG TCTGTTCAAC AGCCAGCTTG GCGAGGACGC AGTGCTGGGC GAACGGGTTC GCGACCGCAG CGGCAAGTTC CGCATTCATA TCCGCCAGCT CGATTGGCAG CGCTTTCACG AGTTCCTGCC AATCGGTCCC GGTTACCAGC CGCTTTGTGC GCTGGTGCGC TTCACCCTGC GTGACCCGCT CGACTATGAC ATCCGACTGG TCCTGCGCCA CGAGGAAATC CGCGAGTTCC GCATCGGCGC GCAGAACCCG TGCCGCCTTG GCTGGACCAG TTGGCTGGGC CGGGAACGCG CCGATGGCGT GGTGACGCTG GGCAGCAAGA TTCATTAA
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Protein sequence | METAHGFAAP AVSALARGIR EYSLFQAVLL VMDRLREQYP GLGDEALYDQ LEFQANPSLG FPASDIDRVE FFEERGMLRA RLRFNLMGLF GSSSPLPAFY SEQALGDSEE SNPTRNFLDL FHHRLHRLLL PIWRKYRYRV SFQSGASDAF SAQLFSVVGL GGEEIRKARE LNWKRLLPYL GLLSLRAHSA ALIESVLRYY FKHAELLAEQ CIERRVAILE EQRNRLGLFN SQLGEDAVLG ERVRDRSGKF RIHIRQLDWQ RFHEFLPIGP GYQPLCALVR FTLRDPLDYD IRLVLRHEEI REFRIGAQNP CRLGWTSWLG RERADGVVTL GSKIH
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