Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3548 |
Symbol | |
ID | 5353915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 3677696 |
End bp | 3680470 |
Gene Length | 2775 bp |
Protein Length | 924 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640812598 |
Product | transcriptional regulator |
Protein accession | YP_001348902 |
Protein GI | 152986923 |
COG category | [K] Transcription |
COG ID | [COG2909] ATP-dependent transcriptional regulator |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATAT CCCACGGAGA TTTGGCTCCG TACCACAATG ATAATGACAC AGGGATACAG GCCGTGGATG CAGTACAGGA TCCAGCAGCC GGCAGCCTTT CGCGCTCCAG AATAGTGCCG CCTCAGGTGC CAGCCGAATA TTCTCTTCGC CCCGCGATCC GCGCTCTGCT GGATCGCAAC CCTCATTCCC GCGTTCTGAT GTTTTCCGCG CCTGCCGGCT TCGGCAAGAC CTGTGCGCTC GCGGCCCTGG CCAGGGAGCG CACTGTAGCA GACCAGGCGG TGGCCTGGCT GTCGCTGGCC GAGGAGGACG ACGATCCCGC GCGTTTCTGC CGGCAACTCA TCGAAGCCGT TGGCGAAGCT GTACCGCAGT TGGGCGACGA CGCCCAGTCC TATCTGCAGA ACACCATGCG GGTACCGGTG GTGGCGGTCA TCGAAAGCCT GCTCGGCGAG CTCAATCGCC ATGCGCGGCC CCTGCTGCTG GTGCTGGACG ACCTGCACCT GGTGAGCAAC CCCGACATTT TCGCCGGCCT CAACCGCCTG GTGCAGTACG CGCCACCCGG TCTGGTCCTG GCCCTGGGTA CGCGCTCGCA GCCGCCATTG AGCCTGGCCA CCTGGCGGGC CAAGGGGCTG TTGCTGGAGA TCGGCGTCGA GGAATTGCGC CTCGGTTTCG AGGAAACCCG CGAATACCTC GAGCGCAGCG GGCTCTACCT GGACGAGGCC TGCCTCAAGG CGCTGCATGG CCAGACCGAG GGCTGGGTGG TCGGCGTACA TCTCGTCAGC CTGTGGCTGC GCCAGCAGCC GCAAGTCCAG GATCAGCAGA TGGCCCTGCT GGACGGCGAC AAGCAAGCGG TCAGCGCCTA TCTGCTGGCG GCGGTCTTCG AGCGCCTGCC CGACGACCTG CAGCAAGCGC TGCTGGCATT GGGGGTGGCC AGCCAGTTGA GCGGTGACCT GGCCAATGCC CTGACCGGGC GGCAGGACGG CCAGGCGCTG CTGGAACGCC TGGAATCCAT GCAGCTCTTC CTCCTGCCGC TGGATCGCGA GCGGCAGTGG TATCGCTTCC ACCTACTGTT CGCCGAGTTC CTCCGTACCC GCCTGCGCGA GTCCGACCCG GACCGCTTCA AGCAACTGCA TTTCAACGCC AGCCTGTGGT TCACCAACCA CCACATGCCC ACCTTCGCCA TCGAGCACGC CTGCGCCGCG GAGGATCCGG AAATGATCGC CGCGCTGGTC GACGGTTGCG GCCTGGAGCT GATCAACCGC GGGCAGCTCA GCCTGATCTA TCGTTGGCGC AAGCACGTGC CGGACGAAAT TGCCGAACGT TATCCGATCC TGGTGCTCAC CGATGCCTGG TCGCGCGCCA GCGACCTGAG CCTGGGCGAC GCCAACCGGA TCATCGACGA GCTGCTCGCG CGTTGGGGCG AAAGTCGCGG CGACGGTCCG ATGGGCGACC AGTACCTGTC GGCGCTGGCG GTGAAAGCCG TGGTCGCGCT GCAGAAGGAT GACCTGGAAC TGTGCATCTC CCTGGCGCGC CGGGTGGAGG TACAGCTCGG CCAGAACGCC GCCTTCCTCG AAGTGGCTGT TCTGATCACC GCCGCGCTGG CCCAGGTGGT GCGCGGCCAG GCCGACCAGG CGCGACGTCT GCTGGGGCTG GCGCAGCAGC GCAATCATTT CCTCGAAGGG CGCTACCTGG ACATGCAGCT GGCCAACGTC GAGGTGATCC TGGCCCTGGA GCAGGGCCAG GTGAAGCAGG CGCAACTTCT CATCGAGCGG CTCCGGCAGC GCGCCCAGCC TCTGTTCGAG AAGTCCAGGA GCGCCCTGGC CCTGCCCACC ATCACCGAAG CCCTGACCGC CTACTACCGG GTCGAGCTAG AGGGCCTCGA GGAGCGTCTG GGCTGGGCGC TGGGACATGT GGACGTGATC AACCCGATCG ACTTCTATGC CCAGGGACAG ATCTGCCTGG CGCGCACCCA GCGTCTGCTC GGCCGCCCGA AGGAGGCGCT GGCCAGCCTT GCGGCGATGC AGGCCCTGGC CTCGCGCAAC CAGTCGTGGC GTTTCTTCGC CCAGGCCATG GCCGAGGAAA TCAACCTGAT CCTCCAGGAC GTCGGGCCCG ATCGCCTGAA GCGCGCCGAG CAGCGGCTGA AGAGCGTGGA CTGGAACAAG ATGGCCGCGC ACTACCGCAA CATGGCCTTC AACCCGGTCA ACTGGTCGCT GGGCGTGACC CGTGTGCGCC TGTTGCAGGG GCGCGGGCAT TTCAGCGAAG CCTTGCACGA GATCACTCAG TTGCGCGGCA CCCTGCAGCC CGGCTGGCAC GGCCTGCAGC GTCTGCGCCT GGACATCCTG GCGGCGCTCA GCTACCAGCG CCTGGGCTAT CAGGAACGGG CCAACAGCCT GCTCGGCGAA TGCCTGATCA ACGCCGAGCG CGAAGGGGTG CGCAGCCTCT TCGTCGAAGA GGGCGAGGGA ATCCGCCAGT TGCTCCAGCA GCTCGAGTCC ACCGAGCGCC AGCCGGCATT GCAGGCGTTC ATCCGCGGCC TGCTCGGCAT CTGGCCGGGG CAGGGCGTGC GCAAACCCCA GGATGCGCTC GAGGAAGGAC TGACGGAGCG CGAGCGCGAA GTGGTCTGCC TGGCCGCACA GGGTCTATCC AACGAAGAAA TAGGCCAGCG CCTGTCGCTG GCCCTGGGGA CCGTCAAATG GCATCTGCAC AACATCTACG AAAAGCTCAA GGTGCGCAAT CGCACCCAGG CGATCCGGCG GGCCCGCGAA TTGAGCCTGC TCTGA
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Protein sequence | MEISHGDLAP YHNDNDTGIQ AVDAVQDPAA GSLSRSRIVP PQVPAEYSLR PAIRALLDRN PHSRVLMFSA PAGFGKTCAL AALARERTVA DQAVAWLSLA EEDDDPARFC RQLIEAVGEA VPQLGDDAQS YLQNTMRVPV VAVIESLLGE LNRHARPLLL VLDDLHLVSN PDIFAGLNRL VQYAPPGLVL ALGTRSQPPL SLATWRAKGL LLEIGVEELR LGFEETREYL ERSGLYLDEA CLKALHGQTE GWVVGVHLVS LWLRQQPQVQ DQQMALLDGD KQAVSAYLLA AVFERLPDDL QQALLALGVA SQLSGDLANA LTGRQDGQAL LERLESMQLF LLPLDRERQW YRFHLLFAEF LRTRLRESDP DRFKQLHFNA SLWFTNHHMP TFAIEHACAA EDPEMIAALV DGCGLELINR GQLSLIYRWR KHVPDEIAER YPILVLTDAW SRASDLSLGD ANRIIDELLA RWGESRGDGP MGDQYLSALA VKAVVALQKD DLELCISLAR RVEVQLGQNA AFLEVAVLIT AALAQVVRGQ ADQARRLLGL AQQRNHFLEG RYLDMQLANV EVILALEQGQ VKQAQLLIER LRQRAQPLFE KSRSALALPT ITEALTAYYR VELEGLEERL GWALGHVDVI NPIDFYAQGQ ICLARTQRLL GRPKEALASL AAMQALASRN QSWRFFAQAM AEEINLILQD VGPDRLKRAE QRLKSVDWNK MAAHYRNMAF NPVNWSLGVT RVRLLQGRGH FSEALHEITQ LRGTLQPGWH GLQRLRLDIL AALSYQRLGY QERANSLLGE CLINAEREGV RSLFVEEGEG IRQLLQQLES TERQPALQAF IRGLLGIWPG QGVRKPQDAL EEGLTERERE VVCLAAQGLS NEEIGQRLSL ALGTVKWHLH NIYEKLKVRN RTQAIRRARE LSLL
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