| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3476 |
|---|
| Symbol | |
|---|
| ID | 5356396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3600099 |
|---|
| End bp | 3601454 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640812528 |
|---|
| Product | putative amino acid permease |
|---|
| Protein accession | YP_001348837 |
|---|
| Protein GI | 152985755 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.394866 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGAG GAGAAAAGGC CGGCAAGCGC GGCATGGGGT TCTGGACCTG CAGCGCGCTG
GTGATCGGCA ACATGGTCGG CTCGGGTGTG TTCCTGCTCC CCTCCAGCCT GGCTGCGTTC
GGCGGGCTCA GCCTGTTCGG CTGGCTGGTA TCGAGTACCG GTGCGGTGCT GCTGGCGCTG
ACTTTCGCCC GCCTGGCGCG GGTCAACCCT GGCGCCGGCG GCCCCTATGC CTATACCCGC
GACGGCTTCG GCAGCTTCGC CGGCTACCTG TGCGCCTGGA CCTACTGGAA AGCCGCCTGG
ATCGGCAACG CGGCGATCGC GGTGACCCTG GTCGGCTACC TGCGAGTGTT CATCCCGGCG
TTGGCCGATC CGCTGCTGAT GGTCGGCGTC GCCATCGGTG CGATCTGGCT GTGCACCCTG
ATCAACCTGC GTGGCATCGG TACCTTCAGC GTGGTGCAGA ACCTGCTGAC CGTCCTCAAG
CTGCTGCCGT TGCTGCTGGT CGGTATCCTC GGCTGGTTCC ACTTCAATCC GGAGTACCTG
GCGATCCCGG CGCGCAGCGA GCTGCCGAGC ATGGGCTACG CCCAGGCGAT CGCCACCACC
GCGGCGCTGA CCCTGTGGTC GTTCATCGGC CTGGAATCGG CCACCGTGCC GGCGGACGAC
GTCGAGGATC CGCGCCGCAC CATCCCACGC GCGACGCTGT TCGGCACCCT GGCCGCGGCG
GCGCTCTACA TTCTCTCGAT CACCTCGGTG CAGGGGCTGA TGCCACCCGA GGTGCTGGCC
CGCTCCACCT CGCCGTTCGC CGACGCGGCA CGGATCCTGA TGGGCGACTG GGGCTATTAC
CTGGTGGCCG CCGGCGCGGT CATCGCCTGT CTCGGCGCGC TCAATGGCTG GGTGCTGCTG
CAGGGGCAGA TCCCGGTGGC GCCGGCGCGC GACGGGCTGT TCCCGGAGTC GCTCGGCCAG
CTCAACAAGA ACGGCGCGCC GGCCCACGGC CTGCTGGCCT CGGGGCTGCT GGTCACGGCG
CTGGTGATGG TCGACGGGCA TGGTGACCTG GTCGACGTGT TCAACGTGAT CATCCTGCTC
GGCACCATGA CCGGCGTGGT GCCCTACGCG TTCTGCACCG CCGCGCTGTT GCAACTGCTG
GCGGTGCGCC CGGGCGAGTT CTCGCCGCGC TCGCGCCGGC AGTTGCTGGT GATCGGTTCG
CTGGGCTTCG CCTACTCGCT GTGGGCGCTC TACGGCACCG GCCAGCAGGC GATCTTCTGG
GGCTTCCTGG TGCTGATGGC GGGTATCCCG ATGTATACCT GGCGGCAGTG GCGCAACCAG
GTCAACGGGG TGCCTACGCT CAAAGCCAGT GACTGA
|
|---|
| Protein sequence | MAGGEKAGKR GMGFWTCSAL VIGNMVGSGV FLLPSSLAAF GGLSLFGWLV SSTGAVLLAL
TFARLARVNP GAGGPYAYTR DGFGSFAGYL CAWTYWKAAW IGNAAIAVTL VGYLRVFIPA
LADPLLMVGV AIGAIWLCTL INLRGIGTFS VVQNLLTVLK LLPLLLVGIL GWFHFNPEYL
AIPARSELPS MGYAQAIATT AALTLWSFIG LESATVPADD VEDPRRTIPR ATLFGTLAAA
ALYILSITSV QGLMPPEVLA RSTSPFADAA RILMGDWGYY LVAAGAVIAC LGALNGWVLL
QGQIPVAPAR DGLFPESLGQ LNKNGAPAHG LLASGLLVTA LVMVDGHGDL VDVFNVIILL
GTMTGVVPYA FCTAALLQLL AVRPGEFSPR SRRQLLVIGS LGFAYSLWAL YGTGQQAIFW
GFLVLMAGIP MYTWRQWRNQ VNGVPTLKAS D
|
|---|
| |