| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3449 |
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| Symbol | metH |
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| ID | 5357909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3575006 |
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| End bp | 3578710 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640812500 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_001348809 |
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| Protein GI | 152988328 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.625644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCAGCC CGCTCACCGA TCGCAGCGCC CGCCTGCAAG CCCTCCAGCA CGCCCTCAGG
GAACGTATCC TGATCCTCGA TGGCGGCATG GGCACCATGA TCCAGAGCTA CAGGCTGGAA
GAAGCGGACT ACCGCGGCGA GCGCTTCGCC GATTGGCCAA GCGACGTGAA AGGCAACAAC
GACCTCTTGC TGCTGAGCCG CCCGGACGTG ATCCAGGCCA TCGAGAAGGC CTACCTCGAC
GCCGGCGCCG ACATCCTCGA GACCAACACC TTCAACGCTA CCCAGGTGTC CCAGGCCGAC
TACGGCATGC AGGCGCTGGC CTACGAGCTG AACGTCGAAG GGGCGCGCCT GGCCCGCCAG
GTGGCGGACG CGAAGACCGC CCAGACCCCG GACAAGCCGC GCTTCGTCGC CGGCGTGCTC
GGCCCGACCA GCCGCACTTG CTCGATTTCC CCGGACGTGA ACAACCCCGG CTACCGCAAC
GTCACCTTCG ACGAGCTGGT GGAGAACTAC GTCGAGGCGA CCCGTGGCCT GATCGAAGGC
GGCGCCGACC TGATCCTGAT CGAGACCATC TTCGACACCC TCAACGCCAA GGCGGCGATC
TTCGCCGTGC AGGGGGTGTT CGAGGAGCTC GGCGTGGAGC TGCCGATCAT GATCTCCGGG
ACCATCACCG ACGCCTCCGG TCGTACCCTG TCGGGCCAGA CCACCGAGGC CTTCTGGAAC
TCGGTGCGGC ACGCCCGGCC GATCTCGGTG GGCCTGAACT GCGCCCTCGG CGCCAAGGAG
TTGCGGCCGT ACATCGAGGA ATTGTCGACC AAGGCCGACA CCCATGTCTC GGCCCACCCC
AACGCCGGCC TGCCGAACGC CTTCGGCGAA TACGACGAGT CGCCGGCGGA AATGGCCGTG
GTGGTCGAGG AATTCGCTGC GGCTGGTTTC CTCAATATCG TCGGCGGCTG CTGTGGCACC
ACCCCGGCGC ACATCGAGGC GATCGCCAAG GCAGTGGCCA AGTACCCGCC GCGGGCCATC
CCGGAGATTC CCCGGGCCTG CCGCCTGTCC GGCCTGGAGC CGTTCACCAT CGACCGCAGC
TCGCTGTTCG TCAACGTCGG CGAGCGCACC AACATCACCG GTTCGGCCAG GTTCGCCCGG
CTGATCCGCG AGGAAAACTA CGCGGAAGCC CTCGAGGTCG CCCAGCAACA GGTGGAAGCC
GGCGCCCAGG TGATCGACAT CAACATGGAC GAAGGCATGC TGGACTCGAA GGCGGCCATG
GTCACCTTCC TCAACCTGAT CGCCTCCGAG CCCGACATCT CGCGCGTGCC GATCATGATC
GACTCCTCCA AGTGGGAAGT GATCGAGGCC GGGCTGAAGT GCATCCAGGG CAAGGGCATC
GTCAACTCGA TCTCGATGAA GGAAGGCGTC GAGGCCTTCA AGCACCACGC CCGCCTGTGC
AAGCGCTACG GCGCCGCGGT GGTGGTGATG GCCTTCGACG AGGACGGCCA GGCCGACACC
CAGGCGCGCA AGGAAGAAAT CTGCAAGCGC TCCTACGACA TCCTGGTCGA CGAAGTCGGC
TTCCCGCCGG AAGACATCAT CTTCGACGCG AACATCTTCG CCATCGCCAC CGGCATCGAG
GAACACAACA ACTACGCGGT CGACTTCATC AACGCCTGCG CCTACATCCG CGACAACCTG
CCCTACGCCC TCAGCTCGGG CGGAGTGTCC AACGTGTCCT TCTCGTTCCG CGGCAACAAC
CCGGTGCGCG AGGCGATCCA CTCGGTGTTC CTCTACTACG CGATCCGCAA CGGCCTGACC
ATGGGCATCG TCAACGCCGG CCAGCTGGAA ATCTACGACG AGATCCCGAA GGCGCTGCGC
GACCGGGTCG AGGACGTGGT GCTCAACCGC ACGCCCGAGG CCACCGAGGC CCTGCTGGCG
ATCGCCGACG ACTACAAGGG CGGCGGCGCG GTCAAGGAGG CCGAGGACGA GGAATGGCGC
AGCTACAGCG TCGAGAAGCG CCTCGAGCAT GCGCTGGTCA AGGGCATCAC CACCTGGATC
GTCGAGGACA CCGAGGAATG CCGCCAGCGG TGCGCGCGCC CCATCGAGGT CATCGAAGGT
CCGCTGATGG CCGGGATGAA CGTGGTCGGC GACCTGTTCG GCGCCGGCAA GATGTTCCTC
CCGCAGGTGG TCAAGTCCGC GCGAGTGATG AAGCAGGCGG TGGCCCACCT GATTCCCTTC
ATCGAGGCGG AGAAAGGCGA CAAGCCGGAA GCCAAGGGCA AGATCCTGAT GGCCACGGTG
AAGGGCGACG TGCACGACAT CGGCAAGAAC ATCGTCGGCG TGGTGCTCGG CTGCAACGGC
TATGACGTGG TCGACCTCGG CGTGATGGTG CCGGCGGAGA AGATCCTGCA GACCGCAATC
GCCGAGAAAT GCGACATCAT CGGCCTGTCC GGCCTGATCA CGCCGTCGCT GGACGAGATG
GTCCACGTCG CCAAGGAAAT GCAGCGGCAG AATTTCCAGT TGCCGCTGAT GATCGGCGGC
GCCACTACCT CGAAGGCGCA TACCGCGGTG AAGATCGATC CGCAGTACAG CAACGACGCG
GTGGTCTACG TCACCGACGC TTCGCGCGCG GTAGGCGTGG CCACCAGCCT GCTGTCCAAG
GAGCTGAAGG CCGACTACGT GGCCCGCACC CGCGCCGACT ACGCGGTGGT CCGCGAACGC
ACGGCCAACC GCAGCGCCCG CACCGAGCGG CTGAGCTACG AACAGGCGAT CGCCAACAAG
CCGGCGTTCG ACTGGGCCGG CTACCAGGCG CCGACGCCTT CCTTCACCGG CGTCAGGGTG
CTCGACGAGA TCGACCTCGC GGTGCTCGCC GAGTACATCG ACTGGACGCC ATTCTTCATT
TCCTGGGACC TGGCCGGCAA GTACCCGCGC ATCCTCACCG ACGAGGTGGT CGGCGAGGCT
GCCACCTCGT TGTTCAACGA CGCCCGGGCG ATGCTGAAGA AGCTGATCGA CGAGAAGCTG
ATCAAGGCCC GTGCGGTGTT CGGCTTCTGG CCGGCCAACC AGGTCGAGCA CGACGACCTG
GAGGTCTACG ACGCCGACGG CGAGACCCTC GCCACCCTGC ACCACCTGCG GCAGCAGACG
ATCAAGCCGG ACGGCAAGCC GAACCTGTCG CTGGCCGATT TCGTCGCGCC GAAGGACAGC
GGCGTGCGCG ACTACATCGG CGGCTTCATC ACCACCGCCG GGATCGGCGC CGAAGAAGTG
GCCAAGGCGT ACGAAGCCAA GGGCGACGAC TACAACAGCA TCATGGTCAA GGCGCTCGCC
GACCGCCTCG CCGAAGCCTG CGCCGAGTGG CTGCACGAGC GGGTGCGCAA GGAGTACTGG
GGCTACGCCC GCGACGAGCA CCTCGACAAC GAGGCCCTGA TCAAGGAGCA ATACATCGGC
ATCCGCCCGG CACCGGGCTA CCCGGCCTGC CCCGACCATA CCGAGAAAGG CACCCTGTTC
GAACTGCTCG ATCCGCAGGG CCTGTCCGGC GTCAGCCTGA CCGAGCACTA CGCGATGTTC
CCGGCCGCGG CGGTCAGCGG TTGGTATTTC GCCCACCCGC AGGCGCAGTA CTTCGCGGTC
GGCAAGATCG ACAAGGACCA GGTGCAACGC TACAGCCAGC GCAAGGGCCA GGAAGCCAGC
GTCAGCGAAC GCTGGCTGGC GCCGAACCTT GGCTACGACG ACTGA
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| Protein sequence | MSSPLTDRSA RLQALQHALR ERILILDGGM GTMIQSYRLE EADYRGERFA DWPSDVKGNN
DLLLLSRPDV IQAIEKAYLD AGADILETNT FNATQVSQAD YGMQALAYEL NVEGARLARQ
VADAKTAQTP DKPRFVAGVL GPTSRTCSIS PDVNNPGYRN VTFDELVENY VEATRGLIEG
GADLILIETI FDTLNAKAAI FAVQGVFEEL GVELPIMISG TITDASGRTL SGQTTEAFWN
SVRHARPISV GLNCALGAKE LRPYIEELST KADTHVSAHP NAGLPNAFGE YDESPAEMAV
VVEEFAAAGF LNIVGGCCGT TPAHIEAIAK AVAKYPPRAI PEIPRACRLS GLEPFTIDRS
SLFVNVGERT NITGSARFAR LIREENYAEA LEVAQQQVEA GAQVIDINMD EGMLDSKAAM
VTFLNLIASE PDISRVPIMI DSSKWEVIEA GLKCIQGKGI VNSISMKEGV EAFKHHARLC
KRYGAAVVVM AFDEDGQADT QARKEEICKR SYDILVDEVG FPPEDIIFDA NIFAIATGIE
EHNNYAVDFI NACAYIRDNL PYALSSGGVS NVSFSFRGNN PVREAIHSVF LYYAIRNGLT
MGIVNAGQLE IYDEIPKALR DRVEDVVLNR TPEATEALLA IADDYKGGGA VKEAEDEEWR
SYSVEKRLEH ALVKGITTWI VEDTEECRQR CARPIEVIEG PLMAGMNVVG DLFGAGKMFL
PQVVKSARVM KQAVAHLIPF IEAEKGDKPE AKGKILMATV KGDVHDIGKN IVGVVLGCNG
YDVVDLGVMV PAEKILQTAI AEKCDIIGLS GLITPSLDEM VHVAKEMQRQ NFQLPLMIGG
ATTSKAHTAV KIDPQYSNDA VVYVTDASRA VGVATSLLSK ELKADYVART RADYAVVRER
TANRSARTER LSYEQAIANK PAFDWAGYQA PTPSFTGVRV LDEIDLAVLA EYIDWTPFFI
SWDLAGKYPR ILTDEVVGEA ATSLFNDARA MLKKLIDEKL IKARAVFGFW PANQVEHDDL
EVYDADGETL ATLHHLRQQT IKPDGKPNLS LADFVAPKDS GVRDYIGGFI TTAGIGAEEV
AKAYEAKGDD YNSIMVKALA DRLAEACAEW LHERVRKEYW GYARDEHLDN EALIKEQYIG
IRPAPGYPAC PDHTEKGTLF ELLDPQGLSG VSLTEHYAMF PAAAVSGWYF AHPQAQYFAV
GKIDKDQVQR YSQRKGQEAS VSERWLAPNL GYDD
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