Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3277 |
Symbol | |
ID | 5356544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3390850 |
End bp | 3392817 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640812328 |
Product | alpha subunit of geranoyl-CoA carboxylase, GnyA |
Protein accession | YP_001348637 |
Protein GI | 152988409 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCGG ACTACCGCAG CATCCAGCGC ATCCTGGTCG CCAACCGCGG CGAGATCGCC TGCCGGGTGA TGCGCAGCGC GCGCGCCCTC GGCATCGGCA GCGTCGCCGT GCACAGCGAG ATCGACCGCC ACGCCCGCCA CGTCGCCGAA GCCGACATCG CCGTCGACCT GGGCGGCGCC AAGCCCGCCG ACAGCTACCT GCGCGGCGAC CGGATCATCG CCGCCGCTCT CGCCAGCGGA GCCCAGGCGA TCCATCCCGG CTACGGCTTC CTCTCGGAGA ACGCCGGCTT CGCCCGCGCC TGCGAGGAAG CCGGCCTGCT CTTCCTCGGG CCGCCGGCGG CGGCCATCGA CGCCATGGGC AGCAAGTCGG CGGCCAAGGC GTTGATGGAA GACGCCGGGG TGCCGCTGGT GCCCGGCTAC CACGGCGAAG CCCAGGACCT CGAGACCTTC CGCCGGGAAG CCGGGCGGAT CGGCTACCCG GTGCTGCTCA AGGCCGCCGC TGGCGGCGGC GGCAAGGGCA TGAAGGTGGT GGAGCGCGAG GCCGAGCTGG CCGAGGCCCT CTCCTCCGCC CAGCGCGAGG CCAAGGCCGC CTTCGGCGAC GCGCGGATGC TGGTGGAGAA ATACCTGCTC AAGCCGCGCC ACGTGGAGAT CCAGGTGTTC GCCGACCGCC ACGGCCACTG CCTGTACCTC AACGAACGCG ACTGTTCGAT CCAGCGCCGC CACCAGAAGG TCGTCGAGGA AGCCCCCGCT CCCGGTCTCG GCGCGGAACT GCGCCGGGCC ATGGGCGAGG CCGCGGTACG CGCGGCGCAG GCGATCGGCT ACGTCGGCGC CGGTACCGTC GAATTCCTCC TCGACGAACG TGGCCAGTTC TTCTTCATGG AAATGAACAC CCGCCTGCAG GTCGAGCACC CGGTCACCGA GGCCATCACC GGCCTCGACC TGGTCGCCTG GCAGATCCGC GTCGCTCGCG GCGAGGCGCT GCCGCTGACG CAGGAACAGG TGCCGCTGAA CGGCCACGCC ATCGAAGTAC GGCTCTACGC GGAAGACCCC GAGGGCGGCT TCCTTCCCGC CAGCGGCCGC CTGGCGCTAT ACCGCGAAGC GGCCGCCGGC CCCGGCCGGC GGATCGACAG CGGGGTACGC GAAGGCGACG AGGTCTCGCC GTTCTACGAC CCGATGCTGG CCAAGCTGAT CGCCTGGGGC GAAACCCGCG AGGAAGCCCG CCAGCGCCTG CTGGCGATGC TGGCGGAAAC CTCGGTCGGC GGCGTGCGCA GCAACCTGGC GTTCCTCCGC CGCATCCTCG GCCATCCGGC ATTCGCCGCC GCCGAACTGG ACACCGGTTT CATCGCCCGC CACGAAGCCG ACCTGCTGCC GGCGCCAGAG CCGTTGCCGG AGCATTTCTG GCAGGCCGCC GCCGAAGCCT GGTTGCAGAG CGAAGCCGGC TACCGCCGCG ACGACGACCC GCATTCGCCG TGGAGCCGCA ACGACGGCTG GCGCAGCGCC CTGGCGCGGG AGTCGGACCT GGTGCTGCGC TGCCGCGACG AACGCCGTTG CGTCCGCCTG CGCCACGCCA GCCCCAGCCA GTACCGCCTC GATGGCGACG ACCTGGTCAG CCTGGTGGAT GGCGTCACCC GTCGCTCGAC GGCTTTGCGC CGCGGTTCCC AGCTGTTCCT CGAATGGGCT GGCGAACTGC TGACCATCGA AGCCGTCGAC CCGATCGCCG AGGCCGAGGC CGCCCATGCC CACCAGGGCG GTTTGAGCGC GCCGATGAAC GGCAGTATCG TGCGGGTCCT GGTCGAGCCC GGCCAGACGG TCGAAGCCGG CGCCGCCCTG GTGGTGCTGG AGGCGATGAA AATGGAACAC AGCATCCGCG CGCCCCATGC CGGGGTGGTG AAGGCGCTGT ATTGCAGCGA GGGCGAACTG GTCGAGGAAG GCACGCCGCT GGTGGAGCTG GACGAGAACC AGGCCTGA
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Protein sequence | MSPDYRSIQR ILVANRGEIA CRVMRSARAL GIGSVAVHSE IDRHARHVAE ADIAVDLGGA KPADSYLRGD RIIAAALASG AQAIHPGYGF LSENAGFARA CEEAGLLFLG PPAAAIDAMG SKSAAKALME DAGVPLVPGY HGEAQDLETF RREAGRIGYP VLLKAAAGGG GKGMKVVERE AELAEALSSA QREAKAAFGD ARMLVEKYLL KPRHVEIQVF ADRHGHCLYL NERDCSIQRR HQKVVEEAPA PGLGAELRRA MGEAAVRAAQ AIGYVGAGTV EFLLDERGQF FFMEMNTRLQ VEHPVTEAIT GLDLVAWQIR VARGEALPLT QEQVPLNGHA IEVRLYAEDP EGGFLPASGR LALYREAAAG PGRRIDSGVR EGDEVSPFYD PMLAKLIAWG ETREEARQRL LAMLAETSVG GVRSNLAFLR RILGHPAFAA AELDTGFIAR HEADLLPAPE PLPEHFWQAA AEAWLQSEAG YRRDDDPHSP WSRNDGWRSA LARESDLVLR CRDERRCVRL RHASPSQYRL DGDDLVSLVD GVTRRSTALR RGSQLFLEWA GELLTIEAVD PIAEAEAAHA HQGGLSAPMN GSIVRVLVEP GQTVEAGAAL VVLEAMKMEH SIRAPHAGVV KALYCSEGEL VEEGTPLVEL DENQA
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