Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_3271 |
Symbol | oprA |
ID | 5354988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 3384167 |
End bp | 3385570 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640812322 |
Product | outer membrane efflux protein OprA |
Protein accession | YP_001348631 |
Protein GI | 152984401 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCTTT CGAAACTCTC GGCCTCCTCC CTGGCGCTGT GCCTGGGCCT GCTCGGCGCC TGTTCGCTGG CGCCCCGCTA CCAGCGCCCG GAGGCGCCGA TCCCGACGGC CTATCCGGCC GTCCCGGCGA GCCAGCAGGC TGGCGACCGG GCCAGGCTGG ACGACTGGCA ACAACAGTTC ACCGACCCGG TGCTGCGCCA GATGATCGGC CAGGCCCTGG AGCACAACCG CAACCTGCGC GTCGCCGCCC TGCGCATCGA GGAAGCCCGC GCGCTATATG GCGTACAGGC CTCGGAGCGC TTGCCGACGC TGGAGGCCAG CGGTCGCTAC GAGCGCGAGC GCATGCGCGG CGAAACCCGC GAGGCCGGCC AGGTCGAACA GCGCTATCGG GTCGCAGCCG GCATCAGCGC CTTCGAGCTG GACTTCTTCG GCCGGGTGAA AAACCTCGGC GACGCCGCCC TGGCCGACTA CCTGGCCAGC GAGGAGGCCC AGCGCAGCGC GCGGATCGCC CTGATCGCCG AGGTCGCCGG CGGCTACGTG CAGGAACGGG CGCTGTACGC ACAGCAACGG CTGGCGGAAC GCACCCTGCA CGCGCGCGAA AACGGCCTGG CGCTGGTGCG CAAGCGCTAC GCCGCCGGGA TGAGCACGCG CATCGACCTG CGCAGCGAGG AAATGCTGGT GGAAAGCGCC CGCGCCACCC ACGCCGCGCT GGTTCGCGAA CGCAGCCAGG CGGTCAGCGG CCTGCAGCTG CTGCTCGGCG ACTTCACCGG CGACTGGCAG GATAGCCAGC TGGACCTGGA ACACCTCCAG CTGCAGCCAC TGCCCGCCGG ACTGCCCTCG GAGCTGCTCG CGCGGCGTCC GGACATCCGC CAGGCCGAAC AACAACTGCG CGCGGCCAAC GCCAACATCG GCGCGGCGCG CGCGGCGTTC TTCCCGAGCC TGCGCCTGAG CACCGACCTG GGCTCGGCCA GTTCAGGCCT GCACGGCCTG TTCAGGGGCG GCAGCCGGGT CTGGACCTTC AGCCCGCAGA TGACCCTGCC GATCTTCGAC GGCGGACGCA ACCGCGCCAA TCTCGACCTC GCCGAAGTGC GCAAGGACAT CGCCGTCAAC CGCTACGAGG AAAGCATCCA GGTCGCCTTC CGCGAGGTCG CCGACGCGCT CAGCGCCGGC GACCAGCTGG AGCTCCAGCT GCGCGCGCAG CGCGCTGTCC GCGACGCCGA CCGTGAACGC CTGCAACTGG TACGCAAGCG CTATGCCAAG GGTGTCGCCA ATTACCTGGA AATGCTCGAC GCCCAGCGCA GCCTGTTCGA CTCGGAACAG CAACTGATCC ACCTGCGGGG CCTGCGCCTG AACAATGGCG TCGCCCTCTA TCGCGCCCTC GGCGGCGGCT GGTCGCAAGG CTGA
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Protein sequence | MPLSKLSASS LALCLGLLGA CSLAPRYQRP EAPIPTAYPA VPASQQAGDR ARLDDWQQQF TDPVLRQMIG QALEHNRNLR VAALRIEEAR ALYGVQASER LPTLEASGRY ERERMRGETR EAGQVEQRYR VAAGISAFEL DFFGRVKNLG DAALADYLAS EEAQRSARIA LIAEVAGGYV QERALYAQQR LAERTLHARE NGLALVRKRY AAGMSTRIDL RSEEMLVESA RATHAALVRE RSQAVSGLQL LLGDFTGDWQ DSQLDLEHLQ LQPLPAGLPS ELLARRPDIR QAEQQLRAAN ANIGAARAAF FPSLRLSTDL GSASSGLHGL FRGGSRVWTF SPQMTLPIFD GGRNRANLDL AEVRKDIAVN RYEESIQVAF REVADALSAG DQLELQLRAQ RAVRDADRER LQLVRKRYAK GVANYLEMLD AQRSLFDSEQ QLIHLRGLRL NNGVALYRAL GGGWSQG
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