| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3221 |
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| Symbol | |
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| ID | 5356631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 3330144 |
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| End bp | 3332720 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640812273 |
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| Product | sensory box-containing diguanylate cyclase |
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| Protein accession | YP_001348582 |
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| Protein GI | 152984254 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.137629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGCTT CAGCGATTGC CAGCGGCACC GCAGTTTCCC AGGTCTCCAA GCATCTCCTT
CTGTTCCTGG CCGCCCTTTT CCTCGCCCTC GGTGCATGCG GCTGGGCGAT CCTGCACATC
GCCAGGCAGC AGGACGGCAT CGCCATCGAG CAGAGCCATT TCTACGTGGA AAAGGCGCTG
CAGAACCGCC GGGAAAATTC CGAACAGTTC TCCACCACCT ATTCCTTCTG GACCGACGCC
TACGTCTATC TGGGCAGCCA GGTCGACGTG GACTGGGCCT TCTCCAAGAA CAACCTCGGC
TCGGTGCTCT ACACCACCAA CGGCTACGAC GGAGTCTTCG TCATCGACGA CCGTGGCACT
GGCTACGCCA TGCTCGAGGG CGAGCTGTCC GGGCGCTCGC TGGCCGACGC GCTGAACGCC
GACACCGGGG ACATCCTCCG CGCCGCCCGC CAAGCCGCGC TGGACGAAGC GGCGATCAGC
CGCTACGTCG ACTTCGGCGG CGCACCGGCG ATCCTGGTCG CCTCGGCGAT CAAGCCCACC
AGCGATCATG CGCCCATCGA CCTGGCCAAG GCCTCGGTGC TGGTCTTCCT CGACCGACTG
ACCCCGGAAA AGCTGGCCAA GCTCGGTGGC GACTACGGCA TCGCCAACCT GCACCTGCTG
GCCGGCGGCG CGGCGGGCGA CAAGGAAAGC CTCGCCCTGG AAGGCACTCC CCATCGCCTG
GCCTGGGTGT CGTCGCGCCC GGGCAGCGCG ATGCTGCGGG AAACCGCGTT GCCGCTGCTG
GGAATCTTCG TGGTCGCCGC CGGCCTGCTG TTCTGGTTGA GCCGTAGCGC CCTGCTCAAC
GCTCATGCGG TGGACCGCCA GCAAAAGGTG CTGAAGCGCA GCAACCAGGC CCTGCAGGCC
AGCGAGGAGC GTTTCAAGTC GATAGCCGAA GCGGCCTCGG ACTGGATCTG GGAGGTCGAC
GCGCGTTTCG TCTTCACCTA TCTCTCCACG CGTTTCCGCG AGGTCACCGG CTACCAGCCG
GCGGCATGGA TCGGCCGGCG CCTGGACGAA TTGCTGGGCA GCGACACGGT GAACATCGTC
AAGTGGCTGG AAGGGCTGCC CGATGTCGGC ACGCCATCCA GCCTGGTCTG CAGCTTCCGC
GACGAACTGG GCCAGGCGCG CATCGGCAAG CTGACCGCTA CCGCAATCCG CAACGGCGCG
GGCGACGGCT ATCGCGGCAC GGTCGCCGAC ATCACCGACG AGGTCGAGGC CCACGCGAAG
ATCCAGCACC TGTCACAGCA CGATGCGCTG ACCGGGCTGC CCAACCGCAA CAAGCTGTTC
GGCTTCCTCG AACGCCAGTT GGCGGAGAAG GCCGGCAAGT CGCCGCTGGC GGTGCTGATG
CTCGATCTCG ACCGCTTCAA GCCGATCAAC GACCAGTACG GCCACCCCGC CGGCGATGCG
GTGCTGCATG CGATCGCCGA GCGGTTGCGC GCCTCGACCC GCGACCTGGA CATGGTCGCC
CGGCTCGGCG GCGACGAGTT CGTGGTGGTC AGCGTGCACG TGACGTCGAG ACTGGAGGTC
GAGAAGTTCT GCATACGGCT GATCGAGGTG ATCAATCGCG AAATCCTTCA CGACGAGCAG
GTCTTCCATG TCGGCGCCAG CATTGGCGTG GCCCTGGCCA GCGAGCACGG CGACGACCCG
CGGGCGCTGC TGCGCTGCGC CGACGTGGCG ATGTATGAGG CCAAGGCGGC GGGGCGCAAT
ACCTGGCGCT TCTACTCGGA GGCGATGGAT TTCCACCTTG CCGAGAAGAA GCAGCGCGAA
GCTGAGCTGC GTGCCGCGCT GCAGCGCGGC GAGTTCGAAC TCTACTACCA GCCGCGCTAT
CGGACGGAGG AGGGCAGCAT CGCCTCGGCC GAGGCGCTGA TCCGCTGGCA CCACCCACGA
CGCGGCATGA TCGGCCCCGA TGAATTCATC GGCCTGGCCG AGGAAAGCGA CCTGATCGTG
CAGATCGGCA ACTGGGTCCT GCGCCAGGCC TGCTCCAGCG CGGCCAGCTG GCCGGGCGAG
GTGATGGTCT CGGTGAACGT GTCGCCGGCG CAGTTCATCA GCGGCGACAT CGTCTGGCAG
GTGCGCGAGG CGTTGCGCCT GGCGCACCTG GACGCGCGCC GGCTGGAACT GGAAGTGACG
GAGAATGTCA TGCTCAACGA TGTCGATGGC GCCCTGCGGA CCATGACCGC CCTCAAGGAA
CTGGGCGTGC GCCTGAACAT GGATGACTTC GGTACCGGCT ATTCGTCGCT CGGCTACCTG
CGCACCTATC CCTTCGACAG CATCAAGATC GACAAGCGCT TCATCGCCAA CATGGAGAAG
ACCGGCCGCG ACCGTTCGAT CGTCCAGGCC ATCATCAACC TGGGCAACGC GTTGAACCTG
CGGGTGACCG CCGAAGGCGT GGAGACCGAA GGGCAGATGC GCATCCTGCG CGACGAGAAA
TGCCACGAGC TGCAAGGCTT CCTCCTCAGC CGACCGGTGG ACGGGCAGCG CCTGCAGGCG
CTGCTGCGAA GCGAAACGGC GCTAGCGCCG CCGCCAGCGC GCACCGGCCA TGGCTAG
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| Protein sequence | MLASAIASGT AVSQVSKHLL LFLAALFLAL GACGWAILHI ARQQDGIAIE QSHFYVEKAL
QNRRENSEQF STTYSFWTDA YVYLGSQVDV DWAFSKNNLG SVLYTTNGYD GVFVIDDRGT
GYAMLEGELS GRSLADALNA DTGDILRAAR QAALDEAAIS RYVDFGGAPA ILVASAIKPT
SDHAPIDLAK ASVLVFLDRL TPEKLAKLGG DYGIANLHLL AGGAAGDKES LALEGTPHRL
AWVSSRPGSA MLRETALPLL GIFVVAAGLL FWLSRSALLN AHAVDRQQKV LKRSNQALQA
SEERFKSIAE AASDWIWEVD ARFVFTYLST RFREVTGYQP AAWIGRRLDE LLGSDTVNIV
KWLEGLPDVG TPSSLVCSFR DELGQARIGK LTATAIRNGA GDGYRGTVAD ITDEVEAHAK
IQHLSQHDAL TGLPNRNKLF GFLERQLAEK AGKSPLAVLM LDLDRFKPIN DQYGHPAGDA
VLHAIAERLR ASTRDLDMVA RLGGDEFVVV SVHVTSRLEV EKFCIRLIEV INREILHDEQ
VFHVGASIGV ALASEHGDDP RALLRCADVA MYEAKAAGRN TWRFYSEAMD FHLAEKKQRE
AELRAALQRG EFELYYQPRY RTEEGSIASA EALIRWHHPR RGMIGPDEFI GLAEESDLIV
QIGNWVLRQA CSSAASWPGE VMVSVNVSPA QFISGDIVWQ VREALRLAHL DARRLELEVT
ENVMLNDVDG ALRTMTALKE LGVRLNMDDF GTGYSSLGYL RTYPFDSIKI DKRFIANMEK
TGRDRSIVQA IINLGNALNL RVTAEGVETE GQMRILRDEK CHELQGFLLS RPVDGQRLQA
LLRSETALAP PPARTGHG
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