Gene PSPA7_3018 details

Gene Information

• Locus tag: PSPA7_3018
• ID: 5355257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 3115174
• End bp: 3115839
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640812069
• Product: LuxR family DNA-binding response regulator
• Protein accession: YP_001348378
• Protein GI: 152985518
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.214987
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAGA AGCCTATGAG TAAATTGAAG ATAGTACTGG CCGATGACCA TCCGATCGTG 
CGCATGGGCG TATGCGACAT GCTCGAGCGC GATCCCCGCT TCGAGGTGGT GGGCGAGGCG 
TCCAACCCCA GCGAACTGGT ATCGCTGTAC CGGCAGGCCG ATCCGCACAT CGCCATTACC 
GACTACAGCA TGCCGGGGGA TGAGCGCTAT GGCGACGGGC TGAAGCTGAT CGACTACCTG 
TTGCGCAATT TTCCTCGTAC CCGGGTGCTG ATCTTCACCA TGGTCAGTAA TCGCCTGATC 
CTCGACAGCC TCTACGACCA TGGCGTCGCC GGCGTGGTGC TGAAGAGCGG TGAGCTCGAC 
GAATTGCTCC TGGCGCTCGA CGTCGTGCTG CAGAACCGGA TCTACCGCGG CGCGCACATG 
ATCGACCCGG CCAACGTACT GACCAGTCGC GACGAGGTGG AAAACCGCTT CGCCCGCCTG 
TCGATGAAGG AATTCGAGGT GCTGCGTCAC TTCGTGTCCG GAAACAACGT CTGCGACATC 
GCGCGCCTGC TGAAGCGCAG CGTCAAGACC GTGAGCACGC AGAAGATCTC GGCCATGCGC 
AAGCTGGAAG TGAACAGCGA CCAGGCGCTG ATGACCTTCT GCGTAAGGGC CAACCTGTTC 
CATTGA 

 

Protein sequence

MQEKPMSKLK IVLADDHPIV RMGVCDMLER DPRFEVVGEA SNPSELVSLY RQADPHIAIT 
DYSMPGDERY GDGLKLIDYL LRNFPRTRVL IFTMVSNRLI LDSLYDHGVA GVVLKSGELD 
ELLLALDVVL QNRIYRGAHM IDPANVLTSR DEVENRFARL SMKEFEVLRH FVSGNNVCDI 
ARLLKRSVKT VSTQKISAMR KLEVNSDQAL MTFCVRANLF H