| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2991 |
|---|
| Symbol | lpdA2 |
|---|
| ID | 5359175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 3081622 |
|---|
| End bp | 3083016 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640812042 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_001348351 |
|---|
| Protein GI | 152989284 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA CCCTGAAGAC TACCCTGCTG ATCGTCGGCG GCGGTCCCGG CGGCTACGTC
GCGGCGATCC GTGCCGGGCA GTTGGGCATT CCCACCGTGC TGGTGGAGGG CGCCGCCCTC
GGCGGCACCT GCCTGAACGT CGGCTGCATC CCGTCGAAGG CGCTGATCCA CGCCGCCGAG
GAATACCTCA AGGCCCGCCA CTATGCCGGC CAGTCGGCGC TGGGCATCCA GGTACAGGCG
CCGAGCATCG ACATCGCCCG CACCGTGGAG TGGAAGGACG CCATCGTCGA CCGTCTCACC
AGCGGCGTTG CCGCGCTGCT GAAGAAGCAC GGGGTCACTG TCGTCCAGGG CTGGGCAAGA
ATCCTCGACG GCAAGAGCGT GGCGGTCGAA CTGGCCGGCG GCGGCAGCCA GCGCATCGAC
TGCGAGCACC TGCTGCTGGC CGCCGGCTCG CAGAGCGTCG AGCTGCCGAG CCTGCCGCTG
GGCGGCAAGG TGATCTCCTC CACCGAGGCG CTGGCGCCCG GCAGCCTGCC CGGGCGCCTG
GTGGTGGTCG GCGGCGGCTA CATCGGCCTG GAGCTGGGTA CCGCCTACCG CAAGCTCGGC
GTCGAGGTCG CGGTGGTGGA GGCGCAACCG CGCATCCTGC CGGGCTACGA CGAGGAACTG
ACCAAGCCGG TGGCCCAGGC CCTGCGCAAG CTGGGCGTCG AGCTGTATCT CGGGCACAGC
CTGCTGGGCC CGGGCGAGAA TGGCGTACGG GTCCGCGACG GCGCCGGCGA GGAGCGCGAG
ATCGCCGCCG ACCAGGTGCT GGTGGCGGTC GGCCGCAGAC CGCGCAGCGA AGGCTGGAAC
CTGGAAAGCC TGGGCCTGGA CATGAACGGC CGGGCGGTGA AGGTCGACGA CCAGTGCCGC
ACCTCGATGC GCAATGTCTG GGCCATCGGC GACCTCGCCG GCGAGCCGAT GCTGGCGCAC
CGGGCCATGG CCCAGGGCGA GATGGTCGCC GAGCTGATCG CCGGCAGGCG CCGCCAGTTC
GCCCCGCTGG CGATCCCGGC GGTGTGCTTC ACCGATCCGG AAGTGGTGGT CGCCGGGCTG
TCCCCCGAGC AGGCGAAGGA TGCCGGGCTG GACTGCCTGG TGGCGAGCTT CCCGTTCGCC
GCCAACGGCC GCGCCATGAC CCTGGAGGCC AACGAAGGCT TCGTCCGCGT GGTGGCGCGC
CGCGACAACC ATCTGGTCGT CGGCTGGCAG GCGGTGGGCA AGGCGGTCTC GGAGCTGTCC
ACGGCCTTCG CCCAGTCGCT GGAGATGGGC GCCCGCCTGG AAGACATCGC CGGCACCATC
CACGCCCACC CGACCCTCGG CGAAGCGGTC CAGGAAGCCG CCCTGCGCGC GCTGGGGCAC
GCCCTGCACA TCTGA
|
|---|
| Protein sequence | MSQTLKTTLL IVGGGPGGYV AAIRAGQLGI PTVLVEGAAL GGTCLNVGCI PSKALIHAAE
EYLKARHYAG QSALGIQVQA PSIDIARTVE WKDAIVDRLT SGVAALLKKH GVTVVQGWAR
ILDGKSVAVE LAGGGSQRID CEHLLLAAGS QSVELPSLPL GGKVISSTEA LAPGSLPGRL
VVVGGGYIGL ELGTAYRKLG VEVAVVEAQP RILPGYDEEL TKPVAQALRK LGVELYLGHS
LLGPGENGVR VRDGAGEERE IAADQVLVAV GRRPRSEGWN LESLGLDMNG RAVKVDDQCR
TSMRNVWAIG DLAGEPMLAH RAMAQGEMVA ELIAGRRRQF APLAIPAVCF TDPEVVVAGL
SPEQAKDAGL DCLVASFPFA ANGRAMTLEA NEGFVRVVAR RDNHLVVGWQ AVGKAVSELS
TAFAQSLEMG ARLEDIAGTI HAHPTLGEAV QEAALRALGH ALHI
|
|---|
| |