Gene PSPA7_2967 details

Gene Information

• Locus tag: PSPA7_2967
• Symbol: soxR
• ID: 5354530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa PA7
• Kingdom: Bacteria
• Replicon accession: NC_009656
• Strand: +
• Start bp: 3056051
• End bp: 3056521
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 640812018
• Product: redox-sensitive transcriptional activator SoxR
• Protein accession: YP_001348327
• Protein GI: 152984035
• COG category: [K] Transcription
• COG ID: [COG0789] Predicted transcriptional regulators
• TIGRFAM ID: [TIGR01950] redox-sensitive transcriptional activator SoxR

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0340992
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATT CCTGCGCATC CCGCGAACTG AGCGTCGGCG AACTGGCCAA GCGTGCCGGC 
GTGGCGGTCT CCGCGCTGCA CTTCTACGAA TCCAAGGGGC TGATCAGCAG CCAGCGCAAC 
GCCGGCAACC AGCGTCGTTT CAGCCGCGAG ACGCTGCGCC GGGTGGTGGT GATCAAGGTC 
GCCCAGCGGG TCGGCATTCC CCTGGCGCAG ATCGCCCGTG CCCTGGATAC CCTGCCGGCC 
GGGCGCAGCC CCACGGCGGC GGACTGGGCG CGCCTGTCGG CGCAGTGGAA GGCCGACCTC 
ACGGAGCGAA TCGACAAGCT GCTGCTGTTG CGCGACCAGC TGGACGGCTG CATCGGCTGC 
GGCTGCCTGT CGCTGCAGGC CTGCCCGTTG CGCAATCCCG GCGACCAGCT CTCCGCCGAG 
GGGCCGGGGG CGCACTGGCT GGACGCCGAG GGTCGCGAGC ACGACGGCTA G 

 

Protein sequence

MKNSCASREL SVGELAKRAG VAVSALHFYE SKGLISSQRN AGNQRRFSRE TLRRVVVIKV 
AQRVGIPLAQ IARALDTLPA GRSPTAADWA RLSAQWKADL TERIDKLLLL RDQLDGCIGC 
GCLSLQACPL RNPGDQLSAE GPGAHWLDAE GREHDG