| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2951 |
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| Symbol | gcd |
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| ID | 5359784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 3038841 |
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| End bp | 3041252 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640812002 |
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| Product | glucose dehydrogenase |
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| Protein accession | YP_001348311 |
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| Protein GI | 152987342 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.734246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG GTAACCGGAG TCGATCGCGC CTGCTGCCGA GCCTGCTCGG CCTGTTGATC
CTGCTGTCCG GCCTGGCGCT GCTGGCCGGC GGCATCAAGC TGGCGAGCCT GGGTGGCTCG
CTGTACTACC TGCTGGCCGG CATCGGCCTG GCCCTGAGCG GACTGTTGCT GCTGCTGGGC
AAGCGCGCGG CGCTGGGCCT GTATGCCCTG GTGCTGTTCG CCAGCACCGT CTGGGCGCTA
TGGGAAGTCG GCCTGGACTG GTGGCAGCTG GTGCCGCGCC TGGCCCTGTG GTTCGTCTTC
GGCCTGCTGC TCTGGCTGCC CTGGTTCCGC CGTCCGCTGC TGGCCGACGG TCCGGCGCCG
CTGGGCACCG CGGCGCTGGG CGTGGCGGTG GTCCTGGCCG GCGCCACCGC GGTGGGCAGC
CAGTTCACCA ATCCCGGACA GATCGTCGGC CGCATCGACC GCGACAGCGG CATGACCAGC
ACCGCCCCGG CGATGCCGGA CGGCGACTGG CAGGCCTACG GCCGTACCGA GTTCGGCGAC
CGTTACTCGC CGTTGAAGCA GATCACCCCG GCCAACGTCG GCCAGCTCGA GGAAGCCTGG
CGCATTCGTA CCGGCGACCT GCCGACCGCC GACGATCCGC TCGAACTGAC CAACGAGAAC
ACCCCGCTGA AGGTCAACGG CATGCTCTAT GCCTGCACCG CGCACAGCAA GGTGCTGGCC
CTCGACCCGG ACACCGGCGC GGAAATCTGG CGCTTCGATC CGCAGATCCA GAGCCCGGTA
GGCTTCAAGG GCTTCGCCCA CATGACCTGC CGTGGCGTCT CCTACTACGA CGAAGAGCAG
TACGCCAGGA GCGACGTCGG CGCGCCGCCG GCCGCGCTCT CCGAGGCCGG CAAGGCGGTC
GCCGCCAGTT GCCCGCGGCG GCTGTTCCTG CCCACCGCCG ACGCCCGCCT GATCGCGATC
AACGCCGACA ACGGCAAGGT CTGCGAGGAC TTCGGGGTCA AGGGCGCGGT CGACCTGAAG
GCCGGCATCG GTCCGTTCAC CCCCGGCGGC TACTACTCCA CCTCGCCGGC GGCGGTCACC
CGCAACCTGC TGATCATCGG CGGTCACGTC ACCGACAACG AGTCGACCAA CGAGCCGTCC
GGGGTGATCC GCGCCTTCGA CGTGCACGAC GGCAAACTGG TGTGGAACTG GGACAGCGGT
AACCCGGACC AGACCGAGCC CCTGGCCCCC GGCAAGTTCT ATACCCGCAA CTCGCCGAAC
ATGTGGTCGC TGGCCAGCGT CGACGAGAAG CTCGGCCAGG TCTATCTGCC GCTGGGCAAC
CAGATGCCCG ACCAGTGGGG CGGCAACCGC ACCCCCGGCG CCGAGAAGTT CAGCGCCGGC
CTGGTGGCTC TCGACCTGAA CACCGGCAAG CTGCGCTGGA ACTACCAGTT CACCCACCAC
GACCTGTGGG ACATGGACGT CGGCAGCCAG CCGACCCTGC TCGACCTGAA GACCGCCGAT
GGCGTCAAGC CGGCGCTGAT CGCGCCGACC AAGCAGGGCA GCCTGTACGT GCTGGATCGC
CGCGACGGTA CGCCGATCGT GCCGATCCGC GAGGTGCCGG CGCCGCAGGG GGCGGTGGAG
GGCGACCATA CCGCGCCGAC CCAGGCGCGT TCCGACCTCA ACCTGCTGCG CCCGCCGCTG
ACCGAGCGCG ACATGTGGGG CAGCAGCCCG TTCGACCAGA TGCTCTGCCG CATCCAGTTC
CGCTCGCTGC GCTACGAGGG CCAGTACACC CCGCCGTCGG AGCAGGGCAG CCTGATCTAT
CCGGGCAACG TCGGGGTGTT CAACTGGGGC GGGGTATCGG TCGACCCGGT GCGCCAGATT
CTCTTCACCA GCCCCAACTA CATGGCTTTC GTCTCGCAGA TGGTGCCGCG CGACAAGGTG
CCCACCGGCA GCAAGCGCGA GGGTGAGACC AGCGGCGTGC AGCCGAACAC CGGCGCGCCC
TACGCGGTGA TCATGCATCC GTTCATGTCG CCTCTCGGCC TGCCGTGCCA GGCGCCGTCC
TGGGGCGACG TGGCCGGTAT CGACCTGACC ACCGCCAAGG TCGTCTGGCA GCACAAGAAC
GGCACCAGCC GCGACAACAC CCCGGTACCG ATCGGCCTCT CCGTCGGCGT GCCGAGCATG
GGCGGCTCGA TCACCACCGC CAGCGGCGTG GCTTTCCTCA GCGGCACGCT CGACCAGTAC
CTGCGCGCCT ACGACGTGAA GGACGGCAGG CAGCTCTGGC AGGCGCGCCT GCCGGCCGGC
GGCCAGGCCA CGCCGATGAG CTACACCGGC AAGGACGGTC GCCAGTACGT GCTGATCGTC
GCTGGCGGAC ACGGCTCCTT CGGTACCCGC ATGGGCGACT ACATCATCGC CTACGCCCTG
CCCAGGCAAT GA
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| Protein sequence | MSEGNRSRSR LLPSLLGLLI LLSGLALLAG GIKLASLGGS LYYLLAGIGL ALSGLLLLLG
KRAALGLYAL VLFASTVWAL WEVGLDWWQL VPRLALWFVF GLLLWLPWFR RPLLADGPAP
LGTAALGVAV VLAGATAVGS QFTNPGQIVG RIDRDSGMTS TAPAMPDGDW QAYGRTEFGD
RYSPLKQITP ANVGQLEEAW RIRTGDLPTA DDPLELTNEN TPLKVNGMLY ACTAHSKVLA
LDPDTGAEIW RFDPQIQSPV GFKGFAHMTC RGVSYYDEEQ YARSDVGAPP AALSEAGKAV
AASCPRRLFL PTADARLIAI NADNGKVCED FGVKGAVDLK AGIGPFTPGG YYSTSPAAVT
RNLLIIGGHV TDNESTNEPS GVIRAFDVHD GKLVWNWDSG NPDQTEPLAP GKFYTRNSPN
MWSLASVDEK LGQVYLPLGN QMPDQWGGNR TPGAEKFSAG LVALDLNTGK LRWNYQFTHH
DLWDMDVGSQ PTLLDLKTAD GVKPALIAPT KQGSLYVLDR RDGTPIVPIR EVPAPQGAVE
GDHTAPTQAR SDLNLLRPPL TERDMWGSSP FDQMLCRIQF RSLRYEGQYT PPSEQGSLIY
PGNVGVFNWG GVSVDPVRQI LFTSPNYMAF VSQMVPRDKV PTGSKREGET SGVQPNTGAP
YAVIMHPFMS PLGLPCQAPS WGDVAGIDLT TAKVVWQHKN GTSRDNTPVP IGLSVGVPSM
GGSITTASGV AFLSGTLDQY LRAYDVKDGR QLWQARLPAG GQATPMSYTG KDGRQYVLIV
AGGHGSFGTR MGDYIIAYAL PRQ
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