Gene PSPA7_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPA7_2896 
Symbol 
ID5355137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa PA7 
KingdomBacteria 
Replicon accessionNC_009656 
Strand
Start bp2979662 
End bp2980207 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID640811947 
Producthypothetical protein 
Protein accessionYP_001348256 
Protein GI152983560 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGA GTACGCAGCA CAAGCTGGAC CGGGTGCGCC CGCCGCGCGT GCAGATCACC 
TACGACGTCG AGATCGGCAA CGCCATCGAG AAGAAGGAGC TGCCCCTGGT GGTCGGCATC
CTCGCCGACC TCTCCGGCAA GCCGGATACC CCGCCGGCGA AGCTGGTCGA ACGGCGTTTC
GTCGACATCG ACCGCGACAA CTTCAACGAG ATCCTCTCCT CCATCTCTCC CCGCGCCACC
CTGCAGGTCG ACAACACCAT CAGCGGCGAC GACAGCAAGC TGAACGTCGA GCTGCGCTTC
AACCACATCG AGGACTTCGA CCCGGTCAAC CTGGTGAAGC AGGTGGTCCC GTTGCGTCGC
CTGTTCGAAG CGCGCCAGCG CCTGCGCGAC CTGCTGACCA AGCTCGACGG CAACGACGAC
CTCGACCAGT TGCTGCAGGA CGTGGTGGCC AACACCGAAG GCCTGCAGGA AATCAAAGCG
GCCCGCCCGG AAGCCGAAGC GGCCCCGGCC GGCGACAGCG AACCCCCGGC CGACCAGCCG
GCCTGA
 
Protein sequence
MAESTQHKLD RVRPPRVQIT YDVEIGNAIE KKELPLVVGI LADLSGKPDT PPAKLVERRF 
VDIDRDNFNE ILSSISPRAT LQVDNTISGD DSKLNVELRF NHIEDFDPVN LVKQVVPLRR
LFEARQRLRD LLTKLDGNDD LDQLLQDVVA NTEGLQEIKA ARPEAEAAPA GDSEPPADQP
A