Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2862 |
Symbol | |
ID | 5357830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2939334 |
End bp | 2940986 |
Gene Length | 1653 bp |
Protein Length | 550 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640811913 |
Product | pyoverdine biosynthesis protein PvdE |
Protein accession | YP_001348222 |
Protein GI | 152988552 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.519418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCAA CACCCCGCAG CGCCACTCGC GAACTTCTGA GCATTCTCAA ACCCTTCTGG CCGGCGCTCA GCCTGTCGAT AGGACTGGGC ATCGTCGGCG GCCTGGCCAT CACCGCGCTG CTCACCTCGA TCAACCGCGT ACTGAACGCC GAAGGCGGCA TGACCAGCGG CATGATGCTG GCTTTCAGCG CCATCTGCGC GCTGGCCCTG CTCAGTTCGA TCCTGTCCAA TATCGGCACC AACTACGTCG GCCAGAAGGT CATCGCCCGA CTGCGCAAGA CTCTCGGCGG CCGCGTGCTG TCCGCCCCGA TCGAGCAACT CGAACGCTAC CGCACGCATC GCCTGATCCC GGTGCTCACC CACGACATCG ATACGGTCAG CGATCTCGCC TTCGGCCTGC CGCAACTGGT GATCTCCCTG ACCGTGACCC TCGGCTGCCT GGGCTACCTG GCGACCCTGT CCCTGCCGAT GTTCCTGGTC GCCGCCAGCG CCGTGGTGCT CGGCACCATC GCCCAGTACA TCGCCCGCGG CTATGGCATG GCCGGTTTCG AAGCGGCGCG CGAAGAGGAA GACCTGTTGC AGAAGCACTA CCGCGGCATG GCCGAAGGAG CCAAGGAGCT GCGCATCAAC CGCCCGCGCC GGCAGCGCCT GCACGGGCGA CTGCTGGACG AGACCGTGGA GCGCATCTGC CGCCTGCAGG TGCGTTCGGT GAACATCTTC CTCACCGCCA GCACCTTCGG TTCGCTGCTG TTCTTCGTGG TCATCGGCAC CGCCCTGGCG GTCCAGACCT GGTGGCCGAC CTCCGACCGC AGCGTGCTCA GCGGCTTCGT CATGACCCTG CTGTTCATGA AGGGGCCGCT GGAAAGCGTA CTCAGCCTGT TACCGCTGAT CAGTCGCAAC CGTATCGCCC TGCGCCGGAT CGCCGAACTC AACGAGCAGT TCTCCAATCC CGAACCCTAC CTGCTGCTCG AGAACGATGT CCCCAGGCCG GCGCAGGAGG TGCGCAGCAT CGAGCTGCGC GATGTCGGCT ACAGCTATCC GGGCGTGCCG GGCTCGACGC CCTTCCGCTT CGGCCCGGTC AACCTGACGA TCCGCCCGGG AGAAATCCTC TTCATCGTCG GCGAGAACGG CTGCGGCAAG ACCACCCTGA TCAAGCTGCT GCTCGGCCTG TACACGCCCC ACGAGGGCTC GCTGCTGCTC AACGGCGAGG AGGTGACGGC ACAGGCGCGC GACGACTATC GGCAGCTGTT CACCACCGTG TTCGCCGACT ACTACCTGTT CGACGACCTC GTCGACGGCG AACAACAATT GCCGGAGGAA GCCGGACGCT ACCTGAAGCG CCTGGAAATC GCCCACAAGG TCAGCGTGAG CGACGGCAGC TTCACCACCA CCGACCTGTC CACCGGCCAG CGCAAGCGCC TGGCGCTGGT CAATGCATGG ATCGAGAAGC GCCCGGTACT GGTCTTCGAC GAGTGGGCGG CCGACCAGGA TCCCACCTTC CGCCGGATCT TCTATACCGA GCTGCTTCCC GAGCTGAAGC GAATGGGCAA GACCATCATC GTGATCTCCC ACGACGACCG CTACTTCGAC AGCGCCGACC AGCTGTTGCG CCTGGCCGGT GGCCGGGTGG TCGAGGAGCT GCAACCGGCC TGA
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Protein sequence | MSATPRSATR ELLSILKPFW PALSLSIGLG IVGGLAITAL LTSINRVLNA EGGMTSGMML AFSAICALAL LSSILSNIGT NYVGQKVIAR LRKTLGGRVL SAPIEQLERY RTHRLIPVLT HDIDTVSDLA FGLPQLVISL TVTLGCLGYL ATLSLPMFLV AASAVVLGTI AQYIARGYGM AGFEAAREEE DLLQKHYRGM AEGAKELRIN RPRRQRLHGR LLDETVERIC RLQVRSVNIF LTASTFGSLL FFVVIGTALA VQTWWPTSDR SVLSGFVMTL LFMKGPLESV LSLLPLISRN RIALRRIAEL NEQFSNPEPY LLLENDVPRP AQEVRSIELR DVGYSYPGVP GSTPFRFGPV NLTIRPGEIL FIVGENGCGK TTLIKLLLGL YTPHEGSLLL NGEEVTAQAR DDYRQLFTTV FADYYLFDDL VDGEQQLPEE AGRYLKRLEI AHKVSVSDGS FTTTDLSTGQ RKRLALVNAW IEKRPVLVFD EWAADQDPTF RRIFYTELLP ELKRMGKTII VISHDDRYFD SADQLLRLAG GRVVEELQPA
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