| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2842 |
|---|
| Symbol | |
|---|
| ID | 5355552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2894247 |
|---|
| End bp | 2895215 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640811893 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001348202 |
|---|
| Protein GI | 152986654 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.163599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGTG AGCCGGTGTT CGATCTGAAC GAACTCTTCA TCTACGCCAA GGTGGTCGAG
CACGGCGGTT TCGCGCCTGC CGGACGGGTT CTGGGGATTC CCAAGTCGAC GCTCAGCCGC
AAGGTTGCCC AACTCGAGGC GCGCCTGGGT GTGCGCCTGT TGCAACGCTC GACCCGGCAG
TTCCAGGTCA CCGAGATCGG CCAGGCCTAC TACCGGCATT GCGTGGCAAT GACGGTGGAA
GCCGAGGCCG CCGAGGACGT GATCGAGCAG AACCGTTCGG AACCTTGCGG CACGGTGCGG
CTGACCTGTT CGACGCCGTT GCTGCACTTC GGACTGGCAT CCATGCTGGC ACGCTTCATG
GCGCAGTACC CCAGCGTCGA GCTGTACGTG AAGACCTTCA ACCGCCGCGT CGATGTGATC
GCCGAAGGCT ACGACCTGTC CCTGTCGCTG CGTTTCCCGC CGCTGGAGGA CAGCGACCTG
GTGATGAAGG TGCTGGCGCG CAGCCCGCAG CTGCTGGTGG CGAGCCCGGA ACTGCTGGCG
CGCTACCGTC CGCCGGAGCT GCCGGCCGAT CTCTCGGCGA TGCCTTACGT GGGCTGGGAG
CGTTCGCGCC TGGACGGCAG CCTGCGCCTG GTCGGTCCGG ACGGTAGCAG CGCCAGTCTC
AACCTGCGCC CGCAATTGCT CAGCGACGAC CTCGGCAGCC TGCGCCAGGC GGTGCTCGAA
GGCGTCGGCA TCGGCGGCCT GCCGTCCTGC GTGGTCGGCC GTGACCTGGC CGAGCGACGC
CTGGTGCGGG TGCTGCCGTA CTGGACGCCG GTGGAGGGCA TGGTGGTGGC GATGTTTCCC
TCGCGGCGCG GACTGTTGCC GTCGGTGCGC GCGCTGATCG ACTTTCTCGG CGAGGCGTTT
GGCGAGGCGC ACCGCCGGCA GGTCGAAATC ACCGAGGGGG CGATGCCGGA GCCGGCGCTC
CATGGCTGA
|
|---|
| Protein sequence | MSGEPVFDLN ELFIYAKVVE HGGFAPAGRV LGIPKSTLSR KVAQLEARLG VRLLQRSTRQ
FQVTEIGQAY YRHCVAMTVE AEAAEDVIEQ NRSEPCGTVR LTCSTPLLHF GLASMLARFM
AQYPSVELYV KTFNRRVDVI AEGYDLSLSL RFPPLEDSDL VMKVLARSPQ LLVASPELLA
RYRPPELPAD LSAMPYVGWE RSRLDGSLRL VGPDGSSASL NLRPQLLSDD LGSLRQAVLE
GVGIGGLPSC VVGRDLAERR LVRVLPYWTP VEGMVVAMFP SRRGLLPSVR ALIDFLGEAF
GEAHRRQVEI TEGAMPEPAL HG
|
|---|
| |