Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2782 |
Symbol | |
ID | 5354983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2816979 |
End bp | 2818709 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640811833 |
Product | hemagglutinin |
Protein accession | YP_001348142 |
Protein GI | 152987827 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.582199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGCGGCA GCGGGGTTTC GGTGGTCGTG CCGCTGACCT CGCAACTGCC GCCCGACCTG GCGCGCCGGC AGGTCAACCC GGTCACCCTG CCCGGTTTCA GCCTGCCGCA GGGCGACAAC GGCCTGTTCC GCCTCAGCTC GCGCTTCGCC GAGGACGGCA ACGCCAGCGC CGCGCTCGGT GCCGGCGCCG ACCGCACCCA GGGCGGCAGC GGCGTCTCGG TCGGCCAGCA GGGCGCCGGC AACGCCGCCG GTACCTGGCA GGGCCAGGGC GTGCGAGTCG ACGGCCTGGC TGGCGCGGCC AACGCCCAGG GCCAGGGCGG CAGCGCGCTC GGCGCTGGTG TTGGTCGCTT CGCTGCCAAT CAGGCGATGC AGAACGCTAC ATCCACTGTA TTGAGCCAGG CCTTGGGCCA GGGCGGGAGC CTGAATGAGG CGCTGAAGAG CGCGCTCTAC AACAGTTTCG CGGCGGCAGG TTTCAACTTC GTCGGCGATA TCGGCCAGGA ATACAGCCTG AAGCCAGGCG ATCCGTCGAT GGTGACCATG CACGCCCTGA TGGGTGGCCT GGCGGCGCAG GTCAGCGGTG GCGATTTCGC CACGGGCGCC GCGGCAGCTG GCGCCAATGA AGCGCTGGTG GCCAAGCTAG ACCAGGCCTT CAAGAGCTTG AGCCCTGAGA ACCGTGAAGC CATGGTCACT ATGGGGTCGC AATTGGTTGG TGTTCTGGCT ACGGCGGTAC GCGATCCTGA TGCGACAGGC AAGGCTCTGG AAAGCGCTGC TTGGGTAGCG AAGAACTCGA CGCAATACAA CTTCCTGAAC CATCAGGATG TGGCCGATCT GGATAATGCC TTGCAGAAAT GCAAGTCCCA GGGAAATTGC CGTCAGGTAG AGGAAGAGTT CAAGGCGCGT AGCGACGAGA ACCGGCGGAG GTTGAATGGC TGCGTGGCTG TGGGCAATTG CGCGGAGATT CGTGCGGAGA TCGATGCGGG GTCTAGGGCT CTCAACGAGC TGGTGGCCCG GCAGGAAACA GCTAATCCGG GAGGAAGTGA CAGCGATATA GCCTACGGTT TCCTGATGGG CCGAAACGTC GTCGACTGGA CGACGGCTGG TCAGTTGCAC CTGGAGCAGA CCGCCAACCT CTGGTGGAAC GGCAATCCAC AGTGGCAGAA GGAAGTCGGT GCATACCTGG ACCAGACGGG GTTCAATCCG TTCGGAATCG GCGTTCCGGC AATGGGCGGT GCCGCTGGCA AGGTATCGGC CAAGGCGCTC ATGAATGCGC TGAAGGCGGG AGAGTTGCCC AAAGGAGAGG TGGTCCCAGG AAAGGCTAAT CTGCCTACCA TTGGGGCGTT GGCGGATGCT GAGGCGGGGA TGCCTTATAC CCATCCGGTT AAGCTCGGTG CCAAAGGACT TTCATCGGTC AAGCATGCGT CTGGAGTAGA GCTTCCTAAA AGCCAGGCGC AGATGATTGC TAACTTTGAG ACTGCGGGTT ACCCATCAAA ACCTGTAGTC TCACCAACTA GCGGTAACGT GGTTGGCACG CAATATACTT TGCCCGATGG CTCGCGTGTT CGTGTGATGC AAGCGGATGG GCGTAGTCCT CAAAGAGCGT CGTTTGAAAA TGCTAATGGT GGGCCAATAG ACCCGACGAC GGGTAAGCCA CCGCAGCCAC CGAAAGGGCT TTCTAAAGCT GAAAGGAAAC AGTGGATTAG AGAAAGAACC CATATTGAGC AGGTAGACTA A
|
Protein sequence | MGGSGVSVVV PLTSQLPPDL ARRQVNPVTL PGFSLPQGDN GLFRLSSRFA EDGNASAALG AGADRTQGGS GVSVGQQGAG NAAGTWQGQG VRVDGLAGAA NAQGQGGSAL GAGVGRFAAN QAMQNATSTV LSQALGQGGS LNEALKSALY NSFAAAGFNF VGDIGQEYSL KPGDPSMVTM HALMGGLAAQ VSGGDFATGA AAAGANEALV AKLDQAFKSL SPENREAMVT MGSQLVGVLA TAVRDPDATG KALESAAWVA KNSTQYNFLN HQDVADLDNA LQKCKSQGNC RQVEEEFKAR SDENRRRLNG CVAVGNCAEI RAEIDAGSRA LNELVARQET ANPGGSDSDI AYGFLMGRNV VDWTTAGQLH LEQTANLWWN GNPQWQKEVG AYLDQTGFNP FGIGVPAMGG AAGKVSAKAL MNALKAGELP KGEVVPGKAN LPTIGALADA EAGMPYTHPV KLGAKGLSSV KHASGVELPK SQAQMIANFE TAGYPSKPVV SPTSGNVVGT QYTLPDGSRV RVMQADGRSP QRASFENANG GPIDPTTGKP PQPPKGLSKA ERKQWIRERT HIEQVD
|
| |