| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2715 |
|---|
| Symbol | czcC |
|---|
| ID | 5355833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2736716 |
|---|
| End bp | 2738002 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640811766 |
|---|
| Product | outer membrane protein precursor CzcC |
|---|
| Protein accession | YP_001348075 |
|---|
| Protein GI | 152988235 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.727923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATAC ATCGGCCACT GGCCAGCGCG GGGAAACGCG CCTGCTGGCT ACTGATGGGA
ATCTGCCTGG GGTTGCCGGC GCTGGCTGCG CCCGCGCCGG CCAGTTTCAA CGGGACCTCG
GTCAGCCTAG AACAGGCGCT GGAACGGGCG TTGCAGAGCA ACCCCGGGCT GGCGGCCGTC
GGCCGCGAAA CCGAGATCGC CGCGGGCGCT CGCCAGCAGG CCGGGTTGAT CCCCAATCCG
GAGCTGTCCT GGGATGTCGA GGACACCCGC CAGGGCAATC GCCAGACCAG CGTCAGCCTT
GCCCAGCCGT TGGAGCTCGG CGGCAAGCGC GGCGCGCGGG TCGAGGTGGC GAAGCGTGGC
AGCGAGATCG CCTGGACCCA GCTGGAAGTC CGTCGCGCCG AACTGCGCGC CGAGGTCCGC
GGCGCCTACT ATGCCGCGCT GACCGCGCAG GAGCGGGTGC GCCTGGCGAA GACCTCGCTG
GACCTGGCCA GGCGCGCCCT GCAGGCCGCC GACCGGCGGG TCAAGGCCGG CAGCATTTCC
TCGGTGGAGC GGGTCCGCGC CCAGGTCCTG GCGGACAACG CCCAGCTCGA CCTGAGCCAG
GCGGAGCTGG AGTTGCAGCG CACCTACGTA CAACTGTCGA GCACCTGGAA CGAGCCGCAG
CCCGGCTTCG CCCGGGTCGG CGGCGAACTC GACGCGGTGC CGGCGAGCAT CACCCGTGGC
GCCTTGCTGC GCCATCTCGA CGAGTCGCCG AGCCTGCGCC TGGCGGCCCA GGAAGTGGCG
CGCGGCGAGG CCCAGGTCGA CCTGGAGAAG CGCCAGCGGA TCCCCAACCT GACGGTCAGC
ATCGGCAGCA AGTACGACCA GACCGCCCGC GACGGACGCG GCGAGCGGGT CAACCTGATC
GGCCTGTCGA TGCCGCTGCC GCTGTTCGAC CGCAACCAGG GCAACATCTA CGCCGCCCAG
AGCCGCGCCG ACCAGGCCCG CGACCTGCAG CGCGCGACCC TGCTACGGCT GCGCAGCGAA
GCGGTACAGG CCTACGACCG GTTGCGCACC TCGGAGCAGG AGCTGGCGCT GGTCCGCCGC
GACCTGCTGC CCGGCGCGCA GAGCGCTCTG GACTCGATGA CCCGTGGGTT CGAGATGGGC
AAGTTCAACT TCCTCGATGT GCTCGACGCC CAGCGCACCC TGGTCAGCGT CCGCGCCCAG
TACGTGCGCG CGCTGGACGC CGCGGCGCAG GCGCGGGTGA GCATGGAGCG CCTGCTCGGC
GAAGACATCG GCCACCTCGG CCAGTGA
|
|---|
| Protein sequence | MPIHRPLASA GKRACWLLMG ICLGLPALAA PAPASFNGTS VSLEQALERA LQSNPGLAAV
GRETEIAAGA RQQAGLIPNP ELSWDVEDTR QGNRQTSVSL AQPLELGGKR GARVEVAKRG
SEIAWTQLEV RRAELRAEVR GAYYAALTAQ ERVRLAKTSL DLARRALQAA DRRVKAGSIS
SVERVRAQVL ADNAQLDLSQ AELELQRTYV QLSSTWNEPQ PGFARVGGEL DAVPASITRG
ALLRHLDESP SLRLAAQEVA RGEAQVDLEK RQRIPNLTVS IGSKYDQTAR DGRGERVNLI
GLSMPLPLFD RNQGNIYAAQ SRADQARDLQ RATLLRLRSE AVQAYDRLRT SEQELALVRR
DLLPGAQSAL DSMTRGFEMG KFNFLDVLDA QRTLVSVRAQ YVRALDAAAQ ARVSMERLLG
EDIGHLGQ
|
|---|
| |