| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2710 |
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| Symbol | |
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| ID | 5357973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | + |
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| Start bp | 2729135 |
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| End bp | 2732245 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640811761 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001348070 |
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| Protein GI | 152987543 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTGT CCACGCCCTT CATCCGCCGC CCGGTCGCCA CCACGCTGCT GACCCTGGCG
TTGCTGCTGG CCGGCACCCT GTCGTTCGGC CTGCTGCCGG TGGCGCCGCT GCCCAACGTC
GATTTCCCGG CCATCGTGGT CAGCGCCAGC CTGCCGGGCG CCAGCCCGGA GACCATGGCC
TCGTCGGTGG CCACCCCGCT GGAGCGCTCG CTGGGACGGA TCGCCGGGAT CAGCGAGATG
ACCTCCAGCA GTTCGCTGGG CTCGACCACC GTGGTGCTGG TGTTCGACCT GGAGAAGGAC
ATCGACGGCG CCGCCCGCGA GGTGCAGGCG GCGATCAATG GCGCGATGAG CCTGCTGCCC
AGCGGCATGC CGAACAATCC CAGCTACCGC AAGGCCAACC CCTCGGACAT GCCGATCATG
GTCCTCACCC TGACCTCGGA GACCCAGAGC CGCGGCGAGA TGTACGACCT CGCCTCGACC
GTGCTGGCGC CCAAGCTGTC GCAGGTGCGG GGGGTAGGGC AGGTGAGCAT CGGCGGCAGC
TCGCTGCCGG CGGTGCGGGT CGACCTCAAT CCGGATGCCA TGAGCCAGTA CGGGCTGTCC
CTGGACAGCG TGCGCACGGC CATCGCCGCG GCCAACAGCA ACGGACCCAA GGGCGCCATC
GAGAAGGACG ACAAGCACTG GCAGGTGGAC GCCAATGACC AGTTGCGCAA GGCCCGCGAG
TACCAGCCGC TGGTCATCCA CTACAACGCC GAAAATGGCG CCGCGGTGCG CCTGGGCGAC
GTGGCGAAGA TCAGCGACTC GGTGGAGGAC GTGCGCAACG CCGGCTTCTC CGATGACCTG
CCGGCGGTGC TGCTGATCGT CACCCGCCAG CCCGGCGCCA ACATCATCGA GGCCACCGAC
GCCATCCACG CGCAACTGCC GGTGTTGCAG GAACTGCTCG GGCCGCAGGT CAAGCTGAAC
GTGATGGACG ACCGCAGCCC GTCGATCCGC GCCTCGCTCG CGGAGGCCGA GCTGACCCTG
CTGATCTCGG TGGCGCTGGT GATCCTGGTG GTCTTCCTGT TCCTGCGCAA CGGCCGCGCG
ACGCTGATCC CCAGCCTGGC GGTGCCGGTC TCGCTGATCG GCACCTTCGC GGTCATGTAC
CTGTGCGACT TCAGCCTGAA CAATCTGTCG CTGATGGCGC TGATCATCGC CACCGGCTTC
GTGGTGGACG ACGCCATCGT GGTGGTGGAG AACATCGCCC GGCGCATCGA GGAGGGCGAC
CCGCCGATCC AGGCGGCGAT CACCGGCGCC CGCCAGGTCG GTTTCACCGT GCTGTCGATG
ACGCTCTCGC TGGTCGCGGT GTTCATCCCC CTGCTGCTGA TGGGTGGACT CACCGGACGG
CTGTTCCGCG AGTTCGCGGT GACCCTGTCG GCGGCGATCC TGGTGTCCCT GGTGGTATCC
CTGACCCTCA CGCCGATGCT CTGCGCACGC TTGCTGCGCC CGCTGAAGCG GCCGCAGGGC
GCCTCCCTGG CGCGGCGCGG CGACCGGTTC TTCAGCGCCT TCATGCTGCG CTACCGCGCC
AGCCTGGGCT GGGCGCTGGA GCACTCGCGG CTGATGGTGG TGATCATGCT GGCCTGCATC
GCGATGAACC TCTGGCTGTT CGTGGTGGTG CCCAAGGGCT TCCTCCCGCA GCAGGACTCC
GGGCGCCTGC GTGGCTACGC GGTGGCCGAC CAGAGCATTT CGTTCCAGGC GTTGAGTGCG
AAGATGGGCG AGTACCGCAA GATCCTCTCT TCCGACCCGG CGGTAGAGAA TGTGGTCGGC
TTCATCGGCG GCGGCCGCTG GCAATCGAGC AACACCGGTT CGTTCTTCGT CACCCTCAAG
CCGATCGGCG AACGCGACCC GGTGGAGAAG GTCCTCACCC GGCTGCGCGA GCGGATCGCC
AAGGTGCCCG GCGCGGCGCT CTATCTCAAC GCCGGCCAGG ACGTGCGCCT GGGCGGCCGC
GACAGCAACG CGCAGTACGA ATTCACCCTG CGCAGCGACG ATCTGACCCT GCTCCGCGAA
TGGGCGCCGA AGGTCGAGGC GGCGATGCGC AAGCTGCCGC AGCTGGTGGA CGTCAACAGC
GATTCCCAGG ACAAGGGCGT GCAGACCCGC CTGGTGATCG ACCGCGACCG CGCGGCGACC
CTGGGGATCA ACGTGGAGAT GGTCGACGCG GTGCTCAACG ACTCCTTCGG CCAGCGCCAG
GTGTCGACCA TCTTCAACCC GCTGAACCAG TACCGGGTGG TGATGGAGGT CGACCAGCAG
TACCAGCAGA GCCCGGAAAT CCTCCGCCAG GTCCAGGTGA TCGGCAACGA CGGCCAGCGC
GTGCCGCTGT CCGCGTTCAG CCACTACGAA CCGAGCCGGG CACCGCTGGA GGTCAACCAC
CAGGGCCAGT TCGCCGCCAC CACGCTGTCC TTCAACCTGG CGCCGGGCGC GCAGATCGGC
CCGACCCGCG AGGCCATCAT GCAAGCCCTG GAGCCGCTGC ACATCCCGGT GGACGTGCAG
ACCAGCTTCG AGGGCAACGC CGGCGCGGTG CAGGACACGC AGAACCAGAT GCCCTGGCTG
ATCCTCCTGG CGCTGCTGGC GGTGTACATC GTCCTCGGCA TCCTCTACGA GAGCTACGTG
CACCCGCTGA CCATCCTCTC GACCCTGCCT TCGGCCGGGG TCGGCGCGCT GCTCGCGCTG
ATCCTCTGCC GCAGCGAGCT GAGCCTGATC GCGCTGATCG GCATCATCCT GCTGATCGGC
ATCGTCAAGA AGAACGCCAT CATGATGATC GACTTCGCCC TGGAGGCCGA GCGCAGCCAC
GGCCTGAGCC CGCGCGAGGC GATCCTCGAG GCCTGCATGA TGCGCTTCCG GCCGATCATG
ATGACCACCC TGGCCGCCTT GCTCGGCGCC TTGCCGCTGA TCTTCGGCAT CGGCGGCGAC
GCCGCGCTGC GCCGGCCGCT GGGCATCACC ATCGTCGGTG GGCTGATCGG CAGCCAGTTG
CTGACCCTGT ACACCACCCC GGTGGTCTAC CTCTATCTCG ACCGCCTGCG CCACTGGGTC
AACCAGAAAC GCGGCGTACG CACGGACGGT GCGCTGGAGA CACCCCTATG A
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| Protein sequence | MSLSTPFIRR PVATTLLTLA LLLAGTLSFG LLPVAPLPNV DFPAIVVSAS LPGASPETMA
SSVATPLERS LGRIAGISEM TSSSSLGSTT VVLVFDLEKD IDGAAREVQA AINGAMSLLP
SGMPNNPSYR KANPSDMPIM VLTLTSETQS RGEMYDLAST VLAPKLSQVR GVGQVSIGGS
SLPAVRVDLN PDAMSQYGLS LDSVRTAIAA ANSNGPKGAI EKDDKHWQVD ANDQLRKARE
YQPLVIHYNA ENGAAVRLGD VAKISDSVED VRNAGFSDDL PAVLLIVTRQ PGANIIEATD
AIHAQLPVLQ ELLGPQVKLN VMDDRSPSIR ASLAEAELTL LISVALVILV VFLFLRNGRA
TLIPSLAVPV SLIGTFAVMY LCDFSLNNLS LMALIIATGF VVDDAIVVVE NIARRIEEGD
PPIQAAITGA RQVGFTVLSM TLSLVAVFIP LLLMGGLTGR LFREFAVTLS AAILVSLVVS
LTLTPMLCAR LLRPLKRPQG ASLARRGDRF FSAFMLRYRA SLGWALEHSR LMVVIMLACI
AMNLWLFVVV PKGFLPQQDS GRLRGYAVAD QSISFQALSA KMGEYRKILS SDPAVENVVG
FIGGGRWQSS NTGSFFVTLK PIGERDPVEK VLTRLRERIA KVPGAALYLN AGQDVRLGGR
DSNAQYEFTL RSDDLTLLRE WAPKVEAAMR KLPQLVDVNS DSQDKGVQTR LVIDRDRAAT
LGINVEMVDA VLNDSFGQRQ VSTIFNPLNQ YRVVMEVDQQ YQQSPEILRQ VQVIGNDGQR
VPLSAFSHYE PSRAPLEVNH QGQFAATTLS FNLAPGAQIG PTREAIMQAL EPLHIPVDVQ
TSFEGNAGAV QDTQNQMPWL ILLALLAVYI VLGILYESYV HPLTILSTLP SAGVGALLAL
ILCRSELSLI ALIGIILLIG IVKKNAIMMI DFALEAERSH GLSPREAILE ACMMRFRPIM
MTTLAALLGA LPLIFGIGGD AALRRPLGIT IVGGLIGSQL LTLYTTPVVY LYLDRLRHWV
NQKRGVRTDG ALETPL
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