Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2613 |
Symbol | gacA |
ID | 5357879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2632765 |
End bp | 2633409 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640811664 |
Product | response regulator GacA |
Protein accession | YP_001347976 |
Protein GI | 152986307 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.466832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAAGG TGCTGGTGGT CGACGACCAC GATCTGGTAC GCACCGGTAT TACCCGCATG CTGGCCGACA TCGAAGGCTT GCAAGTGGTC GGCCAGGCCG ACTGCGGTGA GGACTGTCTG AAACTGGCGC GCGAGCTGAA GCCGGACGTG GTCCTGATGG ACGTCAAGAT GCCCGGCATC GGCGGTCTGG AAGCGACCCG CAAGCTGCTG CGCAGCCAGC CCGACATCAA GGTCGTGGTG GTCACCGTCT GCGAGGAGGA TCCGTTCCCC ACTCGCCTCA TGCAGGCCGG CGCCGCCGGC TACATGACCA AGGGCGCGGG GCTGGAGGAG ATGGTCCAGG CGATCCGCCA GGTGTTCGCC GGCCAGCGCT ACATCAGCCC GCAGATCGCC CAGCAGCTGG CGCTGAAATC CTTCCAGCCG CAGCAGCACG ATTCCCCCTT CGATTCGCTG TCCGAGCGCG AGATCCAGAT CGCCCTGATG ATCGCCAATT GCCACAAGGT GCAGAGCATC TCCGACAAGC TGTGCCTGTC GCCGAAGACG GTGAATACCT ACCGCTACCG TATCTTCGAG AAGCTCTCGA TCACCAGCGA TGTGGAACTG GCGTTGCTCG CCGTCCGTCA TGGCATGGTC GACGCCGCCA GCTAG
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Protein sequence | MIKVLVVDDH DLVRTGITRM LADIEGLQVV GQADCGEDCL KLARELKPDV VLMDVKMPGI GGLEATRKLL RSQPDIKVVV VTVCEEDPFP TRLMQAGAAG YMTKGAGLEE MVQAIRQVFA GQRYISPQIA QQLALKSFQP QQHDSPFDSL SEREIQIALM IANCHKVQSI SDKLCLSPKT VNTYRYRIFE KLSITSDVEL ALLAVRHGMV DAAS
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