Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2585 |
Symbol | cspD |
ID | 5354248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2608681 |
End bp | 2608953 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640811636 |
Product | cold shock domain-containing protein CspD |
Protein accession | YP_001347949 |
Protein GI | 152988646 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.169981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAGCG GTAAGGTCAA GTGGTTCAAC AACGCCAAGG GCTACGGGTT CATCCTGGCC GAGGGCCGAG ATGAGGACCT GTTCGCCCAT TACTCGGCCA TTCAGATGGA CGGTTACAAG ACACTCAAGG CGGGCCAGCC GGTCAATTTC GAGATCATCC AGGGACCGAA GGGACTGCAC GCCATCAACA TCAGTCCCGC CACCGCGACA ACCGCCGCAT CCTCCGCCCC CACCCCGCTC GAGGAGCCCC AGGCGTCGCC GATCGAAGCC TGA
|
Protein sequence | MLSGKVKWFN NAKGYGFILA EGRDEDLFAH YSAIQMDGYK TLKAGQPVNF EIIQGPKGLH AINISPATAT TAASSAPTPL EEPQASPIEA
|
| |