| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2346 |
|---|
| Symbol | |
|---|
| ID | 5354660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2398843 |
|---|
| End bp | 2399622 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640811398 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_001347713 |
|---|
| Protein GI | 152989520 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0982615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG AGCTGAGCGC CAACCTGGTC GCCCTGAACA CCATCGTCTA TCGCGAGGTC
CGCCGCTTCA CCCGGATCTG GCCGCAGACC CTGCTGCCGC CGGCGATCAC CATGGTCCTG
TACTTCGTGA TCTTCGGTAA CCTGATCGGC CGGCAGATCG GCGACATGGG CGGCTTCACC
TACATGGAGT ACATCGTGCC CGGCCTGATC ATGATGTCGG TGATCACCAA CGCCTACGGC
AACGTGGTGT CGAGCTTCTT CGGCAGCAAG TTCCAGCGCT CGGTGGAGGA ACTGCTGGTG
TCGCCGGTGT CGCCGCACAC CATCCTCCTC GGCTACACCA TCGGCGGAGT GCTGCGCGGC
CTGGCGGTGG GAGTGATCGT GACCCTGCTG TCGCTGTTCT TCACCAAACT GCAGGTACAC
CACCTGGGCA TCACCGTGCT GGTGGTGGTG CTGACCGCGA CCATCTTCTC CCTGGGTGGT
TTCATCAACG CGGTGTTCGC GCGCAACTTC GACGACATCT CGATCATCCC GACCTTCGTG
CTGACGCCGC TGACCTACCT GGGCGGGGTG TTCTACTCGA TCAACCTGCT GCCGCCGTTC
TGGCAGACGG TGTCGCTGGC CAACCCCATC CTGCACATGG TCAACGCGTT CCGCTACGGC
ATCCTCGGTG TCTCCGACAT CCGCATCGGC GTAGCCATCG GCTTCATGCT GCTGGCCACC
GCGGTCCTCT ATTTCGGCTG CGTGCGACTG CTGGTGAGCG GGCGCGGCAT GCGCCAATAG
|
|---|
| Protein sequence | MSSELSANLV ALNTIVYREV RRFTRIWPQT LLPPAITMVL YFVIFGNLIG RQIGDMGGFT
YMEYIVPGLI MMSVITNAYG NVVSSFFGSK FQRSVEELLV SPVSPHTILL GYTIGGVLRG
LAVGVIVTLL SLFFTKLQVH HLGITVLVVV LTATIFSLGG FINAVFARNF DDISIIPTFV
LTPLTYLGGV FYSINLLPPF WQTVSLANPI LHMVNAFRYG ILGVSDIRIG VAIGFMLLAT
AVLYFGCVRL LVSGRGMRQ
|
|---|
| |