Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2267 |
Symbol | |
ID | 5355918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | - |
Start bp | 2323775 |
End bp | 2324653 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640811320 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_001347639 |
Protein GI | 152987018 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTACG ACTCGATCTT CCGACCTGGC CTGTTCGACG GCCAGACCAT CATCGTCACC GGCGGCGGCA GCGGCATCGG CCGCTGCACC GCCCATGAGC TGGCGGCCCT CGGCGCCCAC GTGGTGCTGG TCGGACGCAA GGCGGAAAAG CTGGAGAAGA CCGCCGGCGA GATCGTCGAG GACGGCGGCA GCGTCAGCTG GCACGCCTGC GACATCCGCG AGGAGGACGC GGTGAAAGGC CTGGTGGCGA ACATCCTGGC CGAACGCGGG AGCATCCACC ACCTGGTCAA CAACGCCGGC GGCCAGTATC CCTCGCCCCT CGCCTCGATC AGCCAGAAGG GCTTCGAGAC CGTGGTCCGC ACCAACCTGG TCGGCGGCTT CCTGGTCGCC CGCGAAGTGT TCAACCAGTC GATGAGCAAG ACCGGCGGCA GCATCGTCAA CATGCTCGCC GACATGTGGG GCGGCATGCC CGGCATGGGC CACTCCGGCG CCGCGCGCTC CGGCATGGAG AACTTCACCA GGACCGCCGC CGTCGAGTGG GGCCATGCCG GCGTGCGGGT CAACGCGGTG GCGCCGGGCT GGATCGCCTC CAGCGGCATG GATACCTACG AAGGCGCGTT CAAGGCGGTG ATCCCGACCC TGCGCGAGCA CGTACCGCTC AAGCGCATCG GCAGCGAGTC GGAAGTCGCC GCCGCCATCG TCTTCCTGCT CTCCCCCGGC GCGGCCTTCA TCAGCGGCAA TACGATCCGC ATCGACGGCG CCGCCAGCCA GGGCAGCCGC GCCTTCCCGC TGGTCAAGGG CAAGCCGGGA CAGAGCCGCG CCTACAACGG CTTCCACCGC GCCTACCTGC CCGACGTGCT GAAGGACCAG GAGGACTGA
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Protein sequence | MSYDSIFRPG LFDGQTIIVT GGGSGIGRCT AHELAALGAH VVLVGRKAEK LEKTAGEIVE DGGSVSWHAC DIREEDAVKG LVANILAERG SIHHLVNNAG GQYPSPLASI SQKGFETVVR TNLVGGFLVA REVFNQSMSK TGGSIVNMLA DMWGGMPGMG HSGAARSGME NFTRTAAVEW GHAGVRVNAV APGWIASSGM DTYEGAFKAV IPTLREHVPL KRIGSESEVA AAIVFLLSPG AAFISGNTIR IDGAASQGSR AFPLVKGKPG QSRAYNGFHR AYLPDVLKDQ ED
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