| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2187 |
|---|
| Symbol | |
|---|
| ID | 5359829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2243823 |
|---|
| End bp | 2244515 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640811240 |
|---|
| Product | putative hydrolase |
|---|
| Protein accession | YP_001347559 |
|---|
| Protein GI | 152986854 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0143931 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGT ATTCATTGCT GGTGTTCGAC TGGGACGGCA CGCTGGTCGA TTCGATCGCG
CGCATCGTCG ATTCGATGAG GGCGGCTGCG ATCGAAACCG GCTTGCCGGG GCGCGACGAT
GATCGGATCA AGGGCATCAT CGGGCTCGGC CTGCCGGAGG CGATCGCCTC GCTCTATCCG
GAGATCGGCG ATCCGGTCCT GGTCGAGCGT TTCCGTTGCG CCTACAGCGA GCATTATCTG
ATGCTCGAAA CCCAGCCGTC GCGGCTGTTC CCGGGTGTGG CCGAGGCCAT GGCGCATTTC
CGCGAGGCCG GGTTCCGTCT GGCGGTGGCC ACCGGCAAGA GCCGGCGTGG CCTGGATCGG
GTGCTGGCGG GGCAGGGCTG GAGCGATTTC TTCGATATCA CCCGTTGTGC CGACGAGACG
GCGAGCAAGC CGGACCCGCT GATGCTTCAT GAGATCCTGG CGCATTGCCG GGTCGAGCCG
GGGCGGGCGC TGATGATCGG CGATTCACCG TTCGACCTGG AGATGGCGCG GCGGGCGGGG
ATGGATTCGG TTGCGGTAGC CTATGGCGCC CAATCGCTGG AGCAGTTGCG GCCCTACGCG
CCGCGGCTGG AGGTCGAACA TTTCGGTGAG TTGCGCGCCT GGTTGAGCGG TGCGCGTCGC
GAAACGGTTG CAGGAGTGGT GGAGCATGTC TGA
|
|---|
| Protein sequence | MTEYSLLVFD WDGTLVDSIA RIVDSMRAAA IETGLPGRDD DRIKGIIGLG LPEAIASLYP
EIGDPVLVER FRCAYSEHYL MLETQPSRLF PGVAEAMAHF REAGFRLAVA TGKSRRGLDR
VLAGQGWSDF FDITRCADET ASKPDPLMLH EILAHCRVEP GRALMIGDSP FDLEMARRAG
MDSVAVAYGA QSLEQLRPYA PRLEVEHFGE LRAWLSGARR ETVAGVVEHV
|
|---|
| |