| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_2174 |
|---|
| Symbol | lolD |
|---|
| ID | 5359203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 2229383 |
|---|
| End bp | 2230066 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640811227 |
|---|
| Product | lipoprotein releasing system ATP-binding protein |
|---|
| Protein accession | YP_001347546 |
|---|
| Protein GI | 152983807 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.638459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACA AGTCGGTGCT GAGTTGCCGC AACCTGAGCA AGAGCTACGA CGAGGGGCCG
CAATCGGTGC AGGTGCTGTC CGGCGTCGAG CTGAACCTGT TGCCCGGCGA GCGGGTGGCC
ATCGTCGGCA GCTCCGGCTC GGGCAAGAGC ACCCTGCTGA ACATGCTCGG TGGCCTGGAC
ACGCCTTCCG CCGGCAGCGT CTGGCTGGCC GGCGAGGAAC TCTCGGCGCT GAACGAGACG
GCGCGCGGGC TGCTGCGCAA CCGCGCGCTG GGCTTCGTCT ACCAGTTCCA CCACCTGCTG
CCCGAGTTCA CCGCCCTGGA GAATGTCTGC ATGCCGCTGC TGATCGGCCG CACGCCGATC
GCCGAAGCGC GCCAGCGCGC GGCCGAGCTG CTGGAGCGGG TAGGCCTGGG GCATCGCCTG
TCGCACAAGC CGGCGGAGCT GTCCGGCGGC GAGCGCCAGC GGGTGGCGAT CGCCCGCGCG
CTGGTCAACC GGCCGCAACT GGTGTTGCTC GACGAGCCCA CCGGCAACCT CGACCAGCAC
ACCGCGCAGG GTATCCAGGA GCTGATGCTG GAACTGAGCC GTTCGTTGCA GACCTCGTTC
CTGGTGGTAA CCCACGATCT CCAGCTGGCC GGGCACATGG ATCGCATCCT GCGCCTGGAA
GAAGGCCGAC TGATCGCCGC GTAG
|
|---|
| Protein sequence | MNDKSVLSCR NLSKSYDEGP QSVQVLSGVE LNLLPGERVA IVGSSGSGKS TLLNMLGGLD
TPSAGSVWLA GEELSALNET ARGLLRNRAL GFVYQFHHLL PEFTALENVC MPLLIGRTPI
AEARQRAAEL LERVGLGHRL SHKPAELSGG ERQRVAIARA LVNRPQLVLL DEPTGNLDQH
TAQGIQELML ELSRSLQTSF LVVTHDLQLA GHMDRILRLE EGRLIAA
|
|---|
| |