Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPA7_2145 |
Symbol | fadB |
ID | 5358104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa PA7 |
Kingdom | Bacteria |
Replicon accession | NC_009656 |
Strand | + |
Start bp | 2198665 |
End bp | 2200812 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640811198 |
Product | multifunctional fatty acid oxidation complex subunit alpha |
Protein accession | YP_001347517 |
Protein GI | 152985884 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTACC AAGGTAAAGC CATCACGGTT AAGCCTCTTG AGGGCGGCAT CGTCGAGTTG AATTTCGATC TCAAGGGCGA GTCCGTCAAC AAGTTCAACC GTCTCACCCT CAGTGAGTTG CGTGCGGCAG TCGATGCGAT CAAGGCCGAT GCAGCGGTCA AGGGCGTGAT CGTGACCAGC GGCAAGGACG TGTTCATCGT TGGTGCCGAC ATCACCGAGT TCGTTGACAA CTTCCAGCTG CCCGACGAGG AACTGATGGC GGGCAACCTC GAAGCCAACA AGATCTTCAG CGACTTCGAA GACCTGGACG TACCCACCGT TGCCGCGATC AACGGCATCG CCCTCGGCGG CGGCCTGGAG ATGTGCCTGG CCGCGGACTT CCGCGTGATG AGCGCGACCG CCAAGGTCGG CCTGCCGGAA GTCAAGCTGG GCATCTACCC GGGCTTCGGC GGCACCGTCC GCCTGCCGCG CCTGATCGGC TGCGACAACG CCGTCGAGTG GATCGCCTCG GGCAAGGAAA ACAAGGCCGA GGACGCCCTG AAGGTCGGCG CCGTCGACGC CGTGGTCGCT CCCGAGCAAC TGCAGGCCGC TGCCCTCGAC CTGGCCAAGC GCGCCGTCGC CGGCGAGCTG GACCACAAGG CCCGGCGCCA GCCGAAGCTG GAAAAGCTGA AGCTGAACGC AATCGAACAG ATGATGGCCT TCGAAACCGC CAAGGGCTTC GTTGCCGGCC AGGCCGGTCC GAACTACCCG GCGCCGGTGG AAGCCATCAA GAGCATCCAG AAGGCCGCCA ACTTCGGCCG CGACAAGGCC CTGGAAGTCG AGGCCGCCGG CTTCGTCAAG CTGGCCAAGA CCTCGGTCGC GCAGAGCCTG ATCGGCCTGT TCCTGAATGA CCAGGAACTG AAGAAGAAGG CCAAGAAGTA CGACGAAGTC GCCAAGGACG TGAAACTGGC CGCCGTGCTC GGCGCTGGCA TCATGGGCGG CGGCATCGCC TACCAGTCGG CGCTCAAGGG CACCCCGATC CTGATGAAGG ATATCCGCGA AGAGGGTATC CAGATGGGCC TGAACGAGGC CGCCAAGCTG CTCGGCAAGC GCGTCGAGAA GGGTCGCCTG ACCCCGGCGA AGATGGCCGA GGCGCTCAAC GGCATCCGTC CGACCATGTC CTATGGCGAC TTCGGCAACG TCGACATCGT CGTCGAAGCC GTGGTCGAGA ACCCCAAGGT CAAGCAAGCC GTGCTCGCCG AAGTGGAAGG CGCGGTGAAG GAGGACGCGA TCATCGCCTC CAACACCTCG ACCATCTCCA TCAGCCTGCT GGCCCAGGCG CTGAAGCGTC CGGAAAACTT CTGCGGCATG CACTTCTTCA ACCCGGTGCA CATGATGCCG CTGGTGGAAG TGATCCGTGG CGAGAAGACC GGCGAAACCG CCATCGCCAC CACCGTCGCC TACGCCAAGA AGATGGGCAA GAGCCCGATC GTGGTCAACG ACTGCCCCGG CTTCCTGGTC AACCGCGTGC TGTTCCCGTA CTTCGGCGGC TTCGCCAAGC TGCTGGGCTT CGGCGTCGAC TTCGTGCGCA TCGACAAGGT GATGGAGAAG TTCGGCTGGC CCATGGGCCC GGCCTACCTG TCCGACGTGG TCGGCATCGA TACCGGCCAC CATGGCCGCG ACGTGATGGC CGAGGGCTTC CCGGACCGCA TGGCGGTCGA GGGCAAGACC GCCGTCGACG TGATGTACGA GGCCAACCGC CTGGGCCAGA AGAACGGCAA GGGTTTCTAC GCCTACGAGA CCGACAAGCG CGGCAAGCCG AAGAAGGTCA CCGATCCGCA GGCCTACGAA GTGCTCAAGC CGATCGTGGT CGAGCAGCGC GAAGTGACCG ACGAGGACAT CGTCAACTTC ATGATGATCC CGCTGTGCCT GGAAACCGTG CGTTGCCTGG AGGACGGCAT CGTCGAGACC GCTGCCGAGG CCGACATGGG CCTGATCTAC GGCATCGGCT TCCCGCCCTT CCGTGGTGGT GCTCTGCGCT ACATCGATTC GATCGGTGTC GCCGAGTTCG TGGCCCTGGC CGACAAGTAC GCCGAGCTGG GCGCGCTGTA CCACCCGACC GCGAAGCTGC GTGAAATGGC CAAGAACGGT CAGAAATTCT TCGGTTAA
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Protein sequence | MIYQGKAITV KPLEGGIVEL NFDLKGESVN KFNRLTLSEL RAAVDAIKAD AAVKGVIVTS GKDVFIVGAD ITEFVDNFQL PDEELMAGNL EANKIFSDFE DLDVPTVAAI NGIALGGGLE MCLAADFRVM SATAKVGLPE VKLGIYPGFG GTVRLPRLIG CDNAVEWIAS GKENKAEDAL KVGAVDAVVA PEQLQAAALD LAKRAVAGEL DHKARRQPKL EKLKLNAIEQ MMAFETAKGF VAGQAGPNYP APVEAIKSIQ KAANFGRDKA LEVEAAGFVK LAKTSVAQSL IGLFLNDQEL KKKAKKYDEV AKDVKLAAVL GAGIMGGGIA YQSALKGTPI LMKDIREEGI QMGLNEAAKL LGKRVEKGRL TPAKMAEALN GIRPTMSYGD FGNVDIVVEA VVENPKVKQA VLAEVEGAVK EDAIIASNTS TISISLLAQA LKRPENFCGM HFFNPVHMMP LVEVIRGEKT GETAIATTVA YAKKMGKSPI VVNDCPGFLV NRVLFPYFGG FAKLLGFGVD FVRIDKVMEK FGWPMGPAYL SDVVGIDTGH HGRDVMAEGF PDRMAVEGKT AVDVMYEANR LGQKNGKGFY AYETDKRGKP KKVTDPQAYE VLKPIVVEQR EVTDEDIVNF MMIPLCLETV RCLEDGIVET AAEADMGLIY GIGFPPFRGG ALRYIDSIGV AEFVALADKY AELGALYHPT AKLREMAKNG QKFFG
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